Ciona intestinalis (yellow sea squirt): 100177180 Help Entry 100177180         CDS       T01056                                  Name (RefSeq) afadin isoform X1   KO K05702   afadin Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04517   IgSF CAM signaling cin04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:cin00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     100177180    04519 Cadherin signaling     100177180 SSDB OrthologParalogGFIT Motif Pfam:  RA DIL PDZ AFDN PDZ_6 PDZ_2 RA_3 PTP3_M Motif Other DBs NCBI-GeneID:  100177180 NCBI-ProteinID:  XP_018669893 LinkDB All DBs Position 12 Genome browser AA seq 1753 aa AA seqDB search MDKERKKLYSLVKQWNESRLDLFCISDPSEKLEFHGVIRFYHQDSTNNGKYATKCVRVSS TACTVDVIITLAEKFRSDMRMLTKPKYGLYEVHVDGDTRKLKDDEKPLLVQLNWVHDDRE GRFLLRNEDNKGPVQVGVGLYDESEDTIKGFKLTRNLTKREKKQQRKNKKLNNIQKKNTE DETNTNTTEISAVKHLYNQVPESTFTRTVSNPEAVMKKRREQKMQKRGADILKIYGDSLN PEIPYKSLLLLPSDKTDVVVRDALDKYGLEKESSSDYNIIKIVLPPGSKPEECFEGGWGR EVALDSDECPLTVMKNWQPHQGTLVFQLRKQPQRMNASKLKSSIRKPSVQSTDRQSMSDS DAKSEEISRYSHPDSSERQKRENTKKQLVTPPKLLQLSKSHDSWIVHPISPNVTEVGCNQ HNAKYGQFIQLHPAPELYPAHCVITNMDGVVTVTPHEGSGKVLVNAKLIEETTMLSHEDI VSLGRRTMLVFCDPGLEIAIPDIRRKMDRVSSLLYPEKQPPKNIQGSPHKTNPNKSSQQR NSRYAVPPTHENNEKRNIGMEQYKPTTSEYQQRGAPGRNKLYSQSETSGMPKQAPPSLPA SISVIRGGEKQLLENIFSVGGNSLHFKLSPSYTSYLFIRSLLPNYNEVVSYLALITELLD HAIQLSSTSVTELAFWMANSSEILNFMRQDLDLFPVTSVAQDKFAKAVQLAFRHLVQCMQ STLFSLMPAFLSESTDDLPGGDTTGLKHQKHSNQLTMYDILHMLSSAMSLLRRCRVNAAL TIQLFSQLFHSINMWLFNKLVSNDSSGKMLCCREWGIRIRTRLGMIETWAEKQGLELAAD CHLARITQATHLLQAPKHSADDIAAISGTCFKLNSLQLQALLRNYQPQLSDGEKQISPEL IDKVVSVAQHSADELTKSDGRDVVLNEDPDLQLPFLLPEDGYSCDVLQGVPSGLTEFINS YRYEVEDFQIISDTSGSWTVHFTHAMHPIEQNRQASIQPSHSSSDVKSPKPEVISVMLNK RSGGMGLSIVAARGSNEHKLGIYIRSVVKDGAADLDGRIQAGDQLLSVDNKSLVGLDQAR AAALMMDTGNFITLRVAKQGAIYHGLATLITEPSPPMSHKIYANQGWNGASPTTPRTQPP QDVKFRKFPEKSSLYDTKKGSVVNQSTPDLNEGKIGSSHFEKNYPRTAMSMISLQQDDRM NYNNQNGVKRYSPQNRVERHDNRPTSYIQSTLRSRNTAPVLVSTRRDGGEEGAERGVRVG GVGAPGGRAFQKHSSLDNPNYDNVPSIRDNSIHSPKHSEPEIRSYRETSQLRSYTTKVPT HFSEPSSPARKATPSNLTAAQILKSSIKSAKAQEKQGERGGKPRMSAQEALSPRVATYKA KTQKLAAEEPPLPPPPQPQELEMLVKEIKQDKSQASKTLGRPFNEKKETKRPPKSKASQL PDSSKSSTLPRHFKSSSSSPWARDDREKREQAIQEELNSLRDEEIEELTARGDSLNSFEK DRLKNLLQEKNFQMRVQEERSRLFSDDDLSGEDCIPDRPDRDRIIQLEDVQAQRDAANKE KMDESVMTQQPPIVTQQPVITHPPAVTPQQPLMTQQSPRMNDKTYTSAFSPTFSVQKNNQ FRNKSRSGPRPISDGYLLSSSINHDITDEVDAPTTPRTLTNAPVNFVPSSSTPGVIGAQE IYNDPRSKREVTMRREQATRQRAPDPSKMTFKDRQRLFQADRSSPVNKPRSSRKLLEIEQ KLLAEMTDDYSLK NT seq 5262 nt NT seq  +upstreamnt  +downstreamnt atggataaagagcgcaagaaattatacagtctggttaaacagtggaatgagagtcgactg gatttgttttgcatttctgaccctagtgagaaacttgaatttcacggcgtgatcagattt tatcaccaagactccactaataacgggaaatatgccacgaaatgtgtgcgagtgtcaagc acagcttgtacagtggacgttatcattactttggccgagaaatttcgctctgacatgaga atgttgaccaaacctaaatatgggttgtatgaagtacatgtagatggagacaccaggaag ttaaaagatgatgagaaaccactgttggttcaacttaactgggttcatgatgacagagag gggaggtttcttttgaggaatgaagataataagggaccggttcaagtcggtgttggttta tatgatgaaagtgaggacacaataaaaggattcaaactcactcggaatctcactaagagg gaaaagaaacagcaacgaaaaaacaaaaaacttaacaacattcagaagaaaaatactgaa gatgaaacaaatacgaacaccactgagatttctgctgtaaaacatctttacaaccaagta cctgaatctactttcacacgaacggtttcgaacccggaagctgtgatgaagaaacgacga gaacagaagatgcagaagagaggggcggacattctaaaaatctacggtgacagtcttaac ccagagatcccatacaagtcattactgttgctccctagtgataaaacagatgttgtggtc cgagatgctcttgataaatacggacttgaaaaagagtcttcctcagattacaacatcatt aagattgtacttcccccgggttcgaaacctgaggaatgttttgaggggggttggggtcgt gaagtggcattagacagcgacgagtgtccactgactgtcatgaaaaactggcaaccccac caaggaaccctggttttccaactacggaaacaaccacagcgtatgaacgcttcaaagtta aaatcatccattcgtaaaccttccgttcaatcgaccgatcgccagtcaatgtcagatagt gatgcaaaatctgaagagatatctcgttactcacatcctgattcaagtgaacgacagaaa agagaaaatacaaagaaacagctggtgaccccacccaagctgttacagttatctaaatcc catgacagttggatagtccaccccatatcccccaatgtaacagaggttggttgtaatcaa cataatgcaaagtatggacagttcattcaactacatccagcacctgagttatacccagca cactgtgttattactaacatggatggtgtggtaacggttacaccacacgagggcagtggt aaggtgctcgttaatgcgaaattaattgaagaaacaacgatgttatcgcacgaggatatt gtttcccttggaagacgaacaatgcttgtgttttgtgatcctggacttgaaattgctata cctgacattcgtaggaaaatggacagagtgtcttctctgctctaccctgaaaaacaaccc ccaaaaaacatccaaggttccccacacaaaaccaatccaaataaaagcagccaacaaaga aattctcgttatgccgtaccccccacacatgaaaataatgagaagcggaacataggcatg gagcaatacaaaccaactacatctgaataccaacagcgaggagcacctggaaggaacaaa ctgtattcacagagtgaaacaagtgggatgcccaagcaagctcctccatcactgcctgcc agcatatctgttataagaggaggtgagaagcaacttctggaaaacatattttctgttggt ggaaattctcttcactttaagttatcaccttcctacacaagttatctatttattcgaagc ttgcttcctaattataacgaagtggtttcttacttggctcttataactgagctattggat catgctattcaattaagctcaacctcagtcacagaactggccttctggatggcaaactca tcagaaatcctcaactttatgaggcaggacctggacttgttcccagtaacctctgttgca caggataagtttgctaaagcagttcaacttgctttcagacacttggtacaatgcatgcag agcaccctgttttcacttatgccggcctttctatctgaatcaacagatgatttacctggt ggggatactactgggttgaaacatcagaaacacagcaaccaacttaccatgtatgacatc cttcacatgttatcctctgccatgtctcttcttcgtcgatgcagagtaaacgctgcactc acaatccaactcttctcccagctcttccactccatcaatatgtggctctttaacaaactt gtgagcaatgactcctctgggaagatgttgtgttgtagggaatggggcatccggatcagg accaggctcggaatgattgaaacttgggcagaaaaacagggtcttgaacttgctgctgac tgtcatcttgcccgcataacacaagccacacacttgttacaagctcctaagcactcagca gatgatatagcagccattagtggcacctgcttcaagttaaactcactccaactacaagca ttactaaggaactaccaaccacagctcagtgatggagagaaacaaatatctccagaactt atcgataaagttgtttctgttgcacaacattcagcagatgagctcacaaagtccgatggt agggatgttgtcctcaatgaagatccggacctccagctcccgtttctgctcccagaggat ggatactcatgtgatgtcctccaaggcgtgccatccggactcacagagttcatcaactca tacagatacgaagttgaagatttccaaataatttccgacacttctggttcatggactgtt catttcactcacgccatgcatcctattgaacagaaccgacaagccagcatacaaccatcc cacagtagttcggatgttaagtccccaaagcccgaagtaatctcggttatgctgaacaaa agatctggaggcatggggctcagtattgtggctgccaggggttccaatgaacacaaacta ggaatctacattcgatctgttgtaaaagatggagcagcagatctggatggaagaatacaa gcaggtgatcaactactgagtgttgataataaatcattggttggacttgaccaagcgaga gctgctgctttgatgatggacactgggaacttcatcactctacgtgttgcgaaacagggg gctatttaccatggccttgctaccctcattaccgagccatcaccccctatgtcccacaaa atctacgcaaaccaggggtggaatggggcttcccctactaccccacgtacccagccaccc caggatgttaaatttcggaaatttcccgagaaatcttcgctttacgatacaaagaaaggg tcagtggtgaatcagtcaacaccagatcttaatgaaggaaaaattggttcaagtcatttt gaaaagaattaccctcgtacagcaatgtctatgattagtttacaacaggatgatagaatg aattacaacaaccagaacggagtaaaacgttacagtcctcagaacagagtagaacgacat gacaacaggcccactagctacattcaatccactttgcgatcgcgtaacactgctcctgtt ttggtgagcacaaggagggatggaggagaagagggagcagaaagaggagtgagagtgggg ggagtgggagcaccaggaggaagagcatttcaaaagcattcatctcttgacaacccaaat tatgataacgtcccatccattcgagacaattcaatccacagtcctaagcattctgaacca gagatcaggtcctacagggaaacaagccagctgaggagttataccacaaaagtgccaacc cacttttcagagccaagttctcctgcacgaaaagcgacaccttccaatttaacagcagca caaatcctaaaatctagcattaaatctgccaaggctcaggagaagcaaggagaaagaggt gggaaaccaagaatgtcagctcaggaagctctttctccacgtgtagcaacctacaaagca aaaacccagaagttagccgctgaggaacccccactacccccaccaccacaaccacaggag ttggaaatgctggtcaaagaaatcaaacaagacaaatcccaggcatcaaagacattgggt cggccgtttaatgagaaaaaagaaacaaaaagacctccaaagtcaaaggcatcccaactt ccagatagcagcaaatcctccactctccctcgtcatttcaagtcctcctcctcctctcca tgggctagggatgatagggagaagagggagcaggcgatccaggaggagcttaattcactc cgtgatgaggaaattgaggaattaactgcaagaggagattctttgaattcttttgagaaa gacaggttgaagaatttgctccaggagaaaaacttccaaatgcgagtccaggaggaaaga tctcgtttgttttcggatgatgatttgtcaggagaggattgcatccctgatcgcccggat cgagaccggatcatccaactggaggatgtgcaagctcaacgtgatgcggcgaataaggag aagatggatgaatctgtgatgactcagcaacccccaatagtgactcagcaaccagtgata actcatccaccagcagtgactccgcagcaaccactaatgactcagcaaagcccaaggatg aacgacaagacttacacgtctgctttttcaccaactttctctgttcaaaagaataaccaa ttcaggaacaaaagcagatcaggcccacgtccaatatctgatggatatcttttgtcaagt tcgatcaaccatgatattactgatgaggttgatgctcccaccactccgaggacactcaca aacgcgccagtcaactttgtaccttcctcttcaaccccaggggttattggggcacaagaa atctacaacgacccgcgctcaaaacgtgaagtaactatgagaagggaacaagcaactcga caaagagctcccgacccttctaaaatgactttcaaagaccgacaacgactgtttcaagct gaccgcagcagcccagtgaacaaaccacgatcttcaaggaaattgttggaaattgagcag aaactactggcagagatgacagatgattattcactcaaataa

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