KEGG   Ciona intestinalis (yellow sea squirt): 100177186
Entry
100177186         CDS       T01056                                 
Name
(RefSeq) sorting nexin-25 isoform X1
  KO
K17887  sorting nexin-25
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:cin03029]
    100177186
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cin04990]
    100177186
Mitochondrial biogenesis [BR:cin03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Morphogenesis factors
    100177186
Domain-containing proteins not elsewhere classified [BR:cin04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   100177186
SSDB
Motif
Pfam: Nexin_C PXA RGS PX TssR_C Isy1 DUF6232
Other DBs
NCBI-GeneID: 100177186
NCBI-ProteinID: XP_026696626
Ensembl: ENSCING00000009881
LinkDB
Position
2:3671179..3681439
AA seq 1022 aa
MMGITGFHNSVLYSSVGLLFLALLVMKPVVLGVVFNLVISLLGICVGCALGVLIMVKLLN
HLETHKLNVETTNTAAQLNSDSRIFVNLSRFQILSRCYHWGSIKVTMLFQSLISRLAASP
LIKSQTEANHTRASVRGRGLYEIIRPYGQTPDDMLASAYGPTAYGTGSTVCVSHNIDEIV
HRVFEYTYRDYVETWYAQVSADHGNLHKMIRADYWDVVKAFSERLSKLDTVNLTMKRFPT
CLLHHFEQLKLTAKSSPEDVKPSFTLHPCLRDRNTELTFLRHICEYILILTLPPEAARIS
SLRTILREILSGLVQLTTALLPMVDSLCDPDYINQTILSFLQWRDTTHEDHTRAYAYAAT
YEDFMKIITECKSVPVLRQIRYRIMTEIIHATTISGLKKDQSKAAKARSMDKGELLISRN
LKRYINQCQVAKQQCEKKIRLLGGGDYGVNYSPLDGSVAGSFESQLLSFEEIMTSPISRS
FFLKYLKKIGRGALLNFWNQVEIVKTTQPTGKALAKLVSYAYQNHVLQGSVEQLPLDIDK
STMKGMQDCVIGNKSPQDFFLVQKQVYDLLKSDHYPSFVVSDIYTYQLMPEINDSTIDGS
MNIAKEDLNKTAFGGDCSSDASLQRLRMLEGKLEYKAQALESLLPSAKLDPKVTEQLEED
IKMLQRAKMKQQIHMERTDAWWEHMGSWAANVQDAYCQQDSSEGSLNGGGPLYTIVVQCS
GVSLYEATDDVSGWVVTRCLSDFHNLHHSLKEYSSWLRKQSLPKLPMFRMRGVSEKFLLE
SKSTLNTYLHNILKDEILRCSQIVYSFLSPGPDCTKIGEDSTSQSSKPTSNFGDFFKRIP
KDVFDRVVKQAAEEENLDSLDDDEDRDSVAAPLYELISEIFELQGLFRFFRRSLIVFVRL
AFGGSINRQVRETSEWLCSEPMLVLYLQTFLDSMWPGGKLAPALQERTEDEKLQTKLEVR
VKLLQSIPEMLNGLVGQENAKRGVLKVFHALQDQRLNKHLFYTLLAEIIEEVFPEILTGN
SN
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgatgggaataactggtttccataactctgtattgtatagttcagtcgggttattgttc
ttggctttgttggtaatgaagccagttgttcttggtgttgtattcaacttggtaatatca
ttgcttggtatttgtgttggctgtgctctaggtgtgttaattatggtaaaacttttaaac
cacctagaaacacataaactgaacgttgaaactacaaacacagcagcacagttgaattct
gacagcagaatcttcgtaaacctatcaaggtttcaaattctatctcgctgctaccattgg
ggaagcataaaagtcacaatgctatttcaatctctgatctcacgcctggcagcttctcct
ttaattaaatctcaaactgaggcaaaccacacaagggctagtgtaaggggcagaggattg
tatgaaattatacgaccgtatggtcaaactccagatgacatgttagcaagtgcatatgga
cccactgcttacggcacgggatccacggtctgtgtctcgcataacattgatgagatcgtc
cacagagttttcgagtacacttacagagattatgtcgaaacctggtatgctcaagtcagt
gcagaccatggaaatcttcacaaaatgattcgtgctgattattgggatgttgtgaaggca
ttttctgagcgacttagcaaactggacactgttaatttaacaatgaaacgatttccaacc
tgtttgctacatcactttgaacaactcaaactcacagcaaaatcgagtccagaagatgta
aaaccatcctttacactccatccctgcctccgggatcggaacacagagcttacttttctt
cgtcacatatgcgaatacatcctcatccttactttacctccagaggctgcaaggatctct
agtttaagaacaatactacgtgaaattttatccggattagtccaattgacaacagcactt
cttccaatggtggacagtttatgtgatcccgactacattaaccaaaccatattatcattc
cttcaatggcgggataccacccatgaagatcatacaagggcgtatgcctatgctgccact
tatgaggattttatgaaaataatcacagaatgcaaaagtgttcctgttcttcgacaaata
agatatcgcatcatgactgaaataatccatgctaccacaattagtggactgaaaaaagat
caaagcaaagcagcaaaagcaagaagcatggataagggtgaacttctcataagtcgtaac
ctgaagaggtacattaaccaatgccaggtcgccaagcagcaatgtgaaaagaaaattcga
ttactcggaggtggagattatggggttaattactctccacttgatggcagtgtagcaggt
tcatttgaaagtcagcttctatcatttgaagaaataatgacgtcccccatatctcgctca
ttctttctcaagtatttaaagaagataggacgtggagctctacttaacttctggaatcag
gttgaaatagtaaaaactacccaacccactgggaaggcactggccaagttagtcagctat
gcttaccagaaccatgttctacaaggatcagtggaacaactcccactcgatattgataaa
tccaccatgaaaggaatgcaggattgtgtcattggaaataaatctcctcaagattttttc
ttggtccagaagcaggtatacgatttgttgaagagtgaccactacccctcatttgtggtg
agtgatatttatacttaccaacttatgccggagataaacgactcaactatcgatgggagt
atgaatattgctaaagaagatttgaataaaacagcctttggtggagattgttcatccgat
gcttcgttacaacgactacgaatgttggagggaaagcttgaatataaagcacaagccctt
gaaagcttgctaccatccgctaaacttgatcctaaggtaacagagcagttggaggaagac
ataaagatgttgcagcgagcgaagatgaagcagcagatccacatggagaggactgatgca
tggtgggaacacatgggaagttgggcggcaaacgtacaagatgcttattgccaacaagat
tcctcagagggttcattaaatggaggtggcccattgtacaccattgttgtgcaatgttct
ggtgtttctctgtatgaagctacagacgatgtatctggatgggtggtcaccagatgcctc
agtgacttccataatctgcatcattcgctgaaagagtatagttcatggcttcgtaagcaa
agtcttccaaaactcccgatgtttagaatgagaggagtatctgaaaagtttctcctggaa
tccaaatccactctcaatacatatctgcataatatattaaaagatgagatcttgagatgc
agtcagatcgtctactcattcctcagcccaggtcccgactgcacgaagatcggcgaggat
tcaacctcccaatcctcgaaaccaacatccaactttggagacttcttcaagagaatccca
aaggatgtttttgatcgtgtagtgaagcaagcagcagaggaagagaaccttgatagttta
gatgatgatgaggacagagattctgtggctgctcctttgtatgaactgatcagtgaaata
tttgaattgcaaggtctctttcgattcttcagaagaagtttaattgtttttgtgagactt
gctttcggtggtagcataaatagacaagtaagagaaacaagcgaatggttgtgctctgaa
cccatgcttgtattatatctgcaaaccttccttgactcaatgtggcctggtgggaaacta
gcgccagcactgcaggagagaaccgaagacgaaaagttgcagactaaacttgaggtacga
gttaagttgttacaaagcataccagagatgttgaatggattagttgggcaggaaaatgca
aagcggggagttctgaaagttttccatgctttgcaggatcaaagattaaacaagcatctg
ttttatactctgctagctgaaataattgaagaagtctttccagaaattcttactggaaac
tccaattaa

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