Ciona intestinalis (yellow sea squirt): 100177186
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Entry
100177186 CDS
T01056
Name
(RefSeq) sorting nexin-25 isoform X1
KO
K17887
sorting nexin-25
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cin03029
]
100177186
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100177186
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
100177186
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100177186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nexin_C
PXA
RGS
PX
TssR_C
Isy1
DUF6232
Motif
Other DBs
NCBI-GeneID:
100177186
NCBI-ProteinID:
XP_026696626
Ensembl:
ENSCING00000009881
LinkDB
All DBs
Position
2:3671179..3681439
Genome browser
AA seq
1022 aa
AA seq
DB search
MMGITGFHNSVLYSSVGLLFLALLVMKPVVLGVVFNLVISLLGICVGCALGVLIMVKLLN
HLETHKLNVETTNTAAQLNSDSRIFVNLSRFQILSRCYHWGSIKVTMLFQSLISRLAASP
LIKSQTEANHTRASVRGRGLYEIIRPYGQTPDDMLASAYGPTAYGTGSTVCVSHNIDEIV
HRVFEYTYRDYVETWYAQVSADHGNLHKMIRADYWDVVKAFSERLSKLDTVNLTMKRFPT
CLLHHFEQLKLTAKSSPEDVKPSFTLHPCLRDRNTELTFLRHICEYILILTLPPEAARIS
SLRTILREILSGLVQLTTALLPMVDSLCDPDYINQTILSFLQWRDTTHEDHTRAYAYAAT
YEDFMKIITECKSVPVLRQIRYRIMTEIIHATTISGLKKDQSKAAKARSMDKGELLISRN
LKRYINQCQVAKQQCEKKIRLLGGGDYGVNYSPLDGSVAGSFESQLLSFEEIMTSPISRS
FFLKYLKKIGRGALLNFWNQVEIVKTTQPTGKALAKLVSYAYQNHVLQGSVEQLPLDIDK
STMKGMQDCVIGNKSPQDFFLVQKQVYDLLKSDHYPSFVVSDIYTYQLMPEINDSTIDGS
MNIAKEDLNKTAFGGDCSSDASLQRLRMLEGKLEYKAQALESLLPSAKLDPKVTEQLEED
IKMLQRAKMKQQIHMERTDAWWEHMGSWAANVQDAYCQQDSSEGSLNGGGPLYTIVVQCS
GVSLYEATDDVSGWVVTRCLSDFHNLHHSLKEYSSWLRKQSLPKLPMFRMRGVSEKFLLE
SKSTLNTYLHNILKDEILRCSQIVYSFLSPGPDCTKIGEDSTSQSSKPTSNFGDFFKRIP
KDVFDRVVKQAAEEENLDSLDDDEDRDSVAAPLYELISEIFELQGLFRFFRRSLIVFVRL
AFGGSINRQVRETSEWLCSEPMLVLYLQTFLDSMWPGGKLAPALQERTEDEKLQTKLEVR
VKLLQSIPEMLNGLVGQENAKRGVLKVFHALQDQRLNKHLFYTLLAEIIEEVFPEILTGN
SN
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaataactggtttccataactctgtattgtatagttcagtcgggttattgttc
ttggctttgttggtaatgaagccagttgttcttggtgttgtattcaacttggtaatatca
ttgcttggtatttgtgttggctgtgctctaggtgtgttaattatggtaaaacttttaaac
cacctagaaacacataaactgaacgttgaaactacaaacacagcagcacagttgaattct
gacagcagaatcttcgtaaacctatcaaggtttcaaattctatctcgctgctaccattgg
ggaagcataaaagtcacaatgctatttcaatctctgatctcacgcctggcagcttctcct
ttaattaaatctcaaactgaggcaaaccacacaagggctagtgtaaggggcagaggattg
tatgaaattatacgaccgtatggtcaaactccagatgacatgttagcaagtgcatatgga
cccactgcttacggcacgggatccacggtctgtgtctcgcataacattgatgagatcgtc
cacagagttttcgagtacacttacagagattatgtcgaaacctggtatgctcaagtcagt
gcagaccatggaaatcttcacaaaatgattcgtgctgattattgggatgttgtgaaggca
ttttctgagcgacttagcaaactggacactgttaatttaacaatgaaacgatttccaacc
tgtttgctacatcactttgaacaactcaaactcacagcaaaatcgagtccagaagatgta
aaaccatcctttacactccatccctgcctccgggatcggaacacagagcttacttttctt
cgtcacatatgcgaatacatcctcatccttactttacctccagaggctgcaaggatctct
agtttaagaacaatactacgtgaaattttatccggattagtccaattgacaacagcactt
cttccaatggtggacagtttatgtgatcccgactacattaaccaaaccatattatcattc
cttcaatggcgggataccacccatgaagatcatacaagggcgtatgcctatgctgccact
tatgaggattttatgaaaataatcacagaatgcaaaagtgttcctgttcttcgacaaata
agatatcgcatcatgactgaaataatccatgctaccacaattagtggactgaaaaaagat
caaagcaaagcagcaaaagcaagaagcatggataagggtgaacttctcataagtcgtaac
ctgaagaggtacattaaccaatgccaggtcgccaagcagcaatgtgaaaagaaaattcga
ttactcggaggtggagattatggggttaattactctccacttgatggcagtgtagcaggt
tcatttgaaagtcagcttctatcatttgaagaaataatgacgtcccccatatctcgctca
ttctttctcaagtatttaaagaagataggacgtggagctctacttaacttctggaatcag
gttgaaatagtaaaaactacccaacccactgggaaggcactggccaagttagtcagctat
gcttaccagaaccatgttctacaaggatcagtggaacaactcccactcgatattgataaa
tccaccatgaaaggaatgcaggattgtgtcattggaaataaatctcctcaagattttttc
ttggtccagaagcaggtatacgatttgttgaagagtgaccactacccctcatttgtggtg
agtgatatttatacttaccaacttatgccggagataaacgactcaactatcgatgggagt
atgaatattgctaaagaagatttgaataaaacagcctttggtggagattgttcatccgat
gcttcgttacaacgactacgaatgttggagggaaagcttgaatataaagcacaagccctt
gaaagcttgctaccatccgctaaacttgatcctaaggtaacagagcagttggaggaagac
ataaagatgttgcagcgagcgaagatgaagcagcagatccacatggagaggactgatgca
tggtgggaacacatgggaagttgggcggcaaacgtacaagatgcttattgccaacaagat
tcctcagagggttcattaaatggaggtggcccattgtacaccattgttgtgcaatgttct
ggtgtttctctgtatgaagctacagacgatgtatctggatgggtggtcaccagatgcctc
agtgacttccataatctgcatcattcgctgaaagagtatagttcatggcttcgtaagcaa
agtcttccaaaactcccgatgtttagaatgagaggagtatctgaaaagtttctcctggaa
tccaaatccactctcaatacatatctgcataatatattaaaagatgagatcttgagatgc
agtcagatcgtctactcattcctcagcccaggtcccgactgcacgaagatcggcgaggat
tcaacctcccaatcctcgaaaccaacatccaactttggagacttcttcaagagaatccca
aaggatgtttttgatcgtgtagtgaagcaagcagcagaggaagagaaccttgatagttta
gatgatgatgaggacagagattctgtggctgctcctttgtatgaactgatcagtgaaata
tttgaattgcaaggtctctttcgattcttcagaagaagtttaattgtttttgtgagactt
gctttcggtggtagcataaatagacaagtaagagaaacaagcgaatggttgtgctctgaa
cccatgcttgtattatatctgcaaaccttccttgactcaatgtggcctggtgggaaacta
gcgccagcactgcaggagagaaccgaagacgaaaagttgcagactaaacttgaggtacga
gttaagttgttacaaagcataccagagatgttgaatggattagttgggcaggaaaatgca
aagcggggagttctgaaagttttccatgctttgcaggatcaaagattaaacaagcatctg
ttttatactctgctagctgaaataattgaagaagtctttccagaaattcttactggaaac
tccaattaa
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