Ciona intestinalis (yellow sea squirt): 100177219
Help
Entry
100177219 CDS
T01056
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100177219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177219
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
100177219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
PH_11
Ank
Ank_5
Roc
PH_6
Arf
CFA69_ARM_rpt
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
100177219
NCBI-ProteinID:
XP_002127442
LinkDB
All DBs
Position
1:complement(7213048..7225995)
Genome browser
AA seq
707 aa
AA seq
DB search
MSNYKQELNNSAAIRQEIQRFEGVHPNIYAVYELLQRIPDHDLQNQIRDHIINIEDSFVN
SQEWTLSKSVPEIKLGILGSVTSGKSALVHRYLTGSYVREESPEGGRFKKEVVVDGQSFL
LLIRDEGGPPEIEFSNWVDGVIFVFSLDDETSFHAIYNYYRRLVQHRSLNNLPLVLVGTQ
DSICSERPRVIFDDRAKKLANDLKRCVYYESCSTYGLNVDHVFHDISHKISTLRRKLDYV
TPPSGHLSTPTTPLHRSASTSSAIYHNNGMRNGSGKSLHGGESSLSISSLLTPTPLRKSS
RRKSNLFSGRKASDSEEKRRLNDLGFGRNIPVKQGWLMKRTSKGKISNKEWKKKYVALED
EGNLTYYSNMHDYMENINKKSLSVVKTTIKVPGKHPAVATKSSPTSKTDENSEFHLISMD
GISWQFLSSCSVERDEWVTAIERQIMISLQNISSTKPNPCKRLFNEIAGNTMCVDCGAPD
PTWVSLNLGCLMCIECSGIHRNLGTHISRVRSLELDDWPVEFTKILDKTGNLIANSIWEG
LLNNDVMKPDPHGTRDARESFIRDKYERKLFLPKLPAKYAADISSSLCYAIADGNSQLTM
HLLAHASRDDVNRSVGSERQAPLHVASSVADLAVVQLLLWSRADPTQLDALNQTPISIAE
QNGHWECHRVMQASLSNNLPQSSKSRNNSTRSESGRPNVNYMYTSAI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattataagcaagaactgaataactctgctgcaatacgtcaggaaatacaaaga
tttgagggcgtgcatcccaacatatatgcagtttatgagcttctacaaagaattcctgac
catgatctacagaaccaaatcagggatcatattatcaacatagaagattcctttgttaac
agtcaggaatggacgttgagtaaatcagttccagaaatcaaactgggcatactgggtagc
gtaactagcggaaaatcagcattggttcatcgatacttgactggttcctatgttcgagaa
gaatctcctgaaggtggaagatttaaaaaggaggttgtcgttgacggacaaagttttctt
ctccttataagggatgaagggggacctccggaaattgagttttccaactgggtggatggg
gtgatatttgtgttcagtttggatgatgaaacatcatttcatgcaatatacaattactac
agaagacttgtacaacatcgttctttgaataatctcccgttggtgttagttggaactcaa
gattcaatttgttctgagcgtcctagagttatttttgacgatcgagcgaagaaacttgcc
aacgatttaaagcgatgtgtgtattacgagtcgtgctcaacttatggtcttaacgttgac
catgtgttccatgatatttcgcacaaaatttccaccttgcgacgaaaattagattatgtg
acgccacccagtggccatctttccacgccaacgactccacttcatcgatcagcgagtaca
tcatctgccatatatcacaacaatggtatgaggaatggaagcggaaaatctttgcatgga
ggggaaagcagtttgtcgataagcagtttattaactcctacaccactgaggaaaagttca
aggaggaaatctaacttattttccggtcggaaagcgagcgattcggaagagaagaggagg
ttgaatgatcttgggttcggtcgtaacatcccggtaaaacaaggatggttgatgaaaaga
acatcaaagggaaagatctcaaacaaagagtggaagaagaaatatgtggcgttggaagat
gaagggaaccttacttactatagtaatatgcatgattacatggagaatattaataagaaa
agtttatctgttgtgaaaaccaccatcaaagtacccgggaaacatccagctgttgctact
aagtcttctccaacttcaaaaacagatgaaaattctgagtttcatttgatttctatggat
ggaatatcatggcagtttctttcctcttgctccgtggagcgcgacgagtgggtaacagcg
atcgaacgacagatcatgattagcctgcagaatatttcttcaaccaaaccaaatccttgc
aagcgtttattcaatgaaatagctggcaacactatgtgtgtggattgtggagcgccagac
ccgacgtgggtgtcacttaacttgggttgcctcatgtgtattgagtgctcgggaattcat
agaaatcttggaactcatatatcaagagttagatcattagaacttgatgattggccggta
gaattcacgaaaattcttgataaaactggaaacctcattgccaactccatctgggaaggt
ttgttgaacaatgacgtgatgaaacctgaccctcatggtaccagggatgcgagggaaagt
ttcattcgagataaatatgaaagaaaattgttcctcccaaaacttccagcaaaatatgct
gcagatataagttcatctttatgttacgcaatcgctgacgggaactctcaattaacaatg
cacctgctcgctcatgcgtcacgggatgatgtcaatcgttctgttggttctgaacgacaa
gccccgttgcatgtggcaagctcagtggctgatttagctgtggtccaacttctcttatgg
tcccgggcagatccaacccagcttgatgctttaaatcaaactccgatctctatagctgag
caaaatggccactgggagtgccacagggtcatgcaagcaagcctgagtaataatctacct
caatcctcaaaatcacgaaacaattccactcgcagcgagtctggcagacccaacgttaat
tacatgtataccagcgcgatttaa
DBGET
integrated database retrieval system
