KEGG   Ciona intestinalis (yellow sea squirt): 100177236
Entry
100177236         CDS       T01056                                 
Name
(RefSeq) sorting nexin-13 isoform X2
  KO
K17925  sorting nexin-13
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cin04990]
    100177236
Domain-containing proteins not elsewhere classified [BR:cin04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   100177236
SSDB
Motif
Pfam: PXA Nexin_C PX RGS
Other DBs
NCBI-GeneID: 100177236
NCBI-ProteinID: XP_002125747
LinkDB
Position
3:complement(5531534..5546656)
AA seq 979 aa
MTETNSTVNSVNGIYWGAIILILGFLTFGLLGLLYAALYLLCFLAGVVAILYDHSQGNVK
QSVKAFAFARTPEALSLSQGIPKVLETDYSKRDFNIDRRLTSSSSIDERLHECLDYLLRD
YIKYWYNGLSDDPEFLHSFLVTLHDVIRALSSRFSSIDWQPYLTKNLVEDFASHVKCFRK
AQVEIQESQTSQQSTDSVESLSASQTNNNNKSDGSDNGSDKAVETILDCFFDFEIKFSKT
CRELVSFGVKKQSEYLQDVSEVLLYLLLPVDEFHCRPLKYMMRELLVHGVFLPMFKLYSD
PDYLNQYVNWLISDNCITSEWFLNVLRHSSEIGELHSIREKCDEEIARLRAKDTVGDDPA
IKQQLGSMRYVKNLCERQIRKKHDGNVYTDNIELDLEGYQTEKSKLYNLPLSVILRNNIA
LQIFIEYMQSVNGQAYLFFWLTVDGYRASAEQQLNEVKLQQLQGAIQRTPDMEMLRAIGH
NIYDQYLSKHAEPRVPLDQTTDRALKKKLDSGEPSPYVFDDIQQKVFGIMQKSESFFPAF
KASPYYMRLLAELDLLRETSLTSNDTNGSVGSSLDDISTSENEEVNKLTAVITQTGICKE
HGKTYAMFAVTVTRHWGNGRQESWDTFRRYREFYDLHLSLKENGSNLSTIRFPGRTFFKD
LKEDFLERRRTELNQYLSSVLSLEHCGKAMECLHTFLDAKAYQKNPRTFASKMDSMMRES
AQSVANFMSQAPDNLIGGIQRASDKVSGGIQKFSDKLPGSERKLSNEENHIEYNIENNIP
LRILLLLMDEVFDLKQRNQWLRRQMVAALQQVITTVFGDRMNRKIVDYVDNAVSAQQVSE
YIRTFQDSFWPGGILADVTPVRDDITVMRTRVLTKTKLHGVIPDEVRPLVGNETSRRGMA
RLFELLQHQELNTRFCYVLLEGVLCRVFPENRFQDLFTKFHSSSPKMRSHKRALMTRGVD
KWKQETRERKSRVLRRFES
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgactgagaccaactcaactgttaactctgtcaatggaatatactggggtgccattatt
ttaattctcggatttctaacatttggtttgcttggacttctctatgctgccctatatctg
ctttgtttcttagcaggagttgtagcaattctttacgaccacagccaaggaaatgtgaaa
caaagtgtcaaagcttttgcgtttgcaagaacaccagaagctttatctttatctcaaggc
attccaaaggtgttggaaacagactactcaaaacgggatttcaatatagatcgtcgttta
acatcatcaagcagcattgatgagagattacatgagtgcctcgactatttactccgtgac
tacatcaagtattggtacaacggattatccgatgatcccgagttcctccacagtttcctc
gttactcttcatgatgtcatcagagctctttcatccaggttcagcagcatagactggcaa
ccttacttaaccaagaacttggttgaagactttgcttcccatgttaaatgcttccgcaaa
gctcaagttgaaattcaagaatcccagacaagccagcagtctacagattctgtcgaaagt
ttatcagcatcacaaacaaacaataacaataaatctgatgggtcagacaatggatcagac
aaagcagtggaaacgattctggattgctttttcgatttcgaaatcaaattttccaaaact
tgtcgagaattagtgtcttttggtgtcaaaaaacaaagtgaatatttacaagatgtgagt
gaagtcttattatatctcttgcttcccgtcgatgaatttcattgtcgaccgctcaaatac
atgatgagggagcttttagtacatggagtatttcttccaatgtttaaactgtacagtgat
ccagactacctcaatcagtacgtcaattggctgataagcgacaattgcattacaagtgag
tggtttcttaacgttttacgacacagctccgagatcggtgaattacactcgatacgtgag
aaatgtgacgaagaaatcgctcgactgcgagccaaggacacggtcggagacgaccccgcc
attaaacaacagctcggtagcatgaggtatgtgaaaaatctatgcgagcgtcagataagg
aagaaacatgacggcaacgtttacactgataatatagaacttgatttggaaggttaccaa
actgagaagagcaaactatacaatcttccattgagtgtgatattgaggaacaacatcgct
ctacaaatttttattgaatacatgcagtcagtgaatgggcaagcatatctgttcttctgg
ttaacagtggatggatatcgtgcgtctgctgaacaacaacttaatgaagtgaagctgcaa
caactacaaggtgccatacaacgaacacctgacatggagatgcttcgtgccataggacac
aacatatatgaccaatacctcagcaaacatgcagaaccacgggtgccgctggatcaaaca
acagatagagccttgaagaagaagcttgactctggggagccatcgccttatgtgtttgat
gatattcaacaaaaggtgtttggcatcatgcagaaaagtgaatctttcttcccagcattt
aaagcaagtccttattacatgaggttgcttgctgaacttgatctgctgcgcgaaacaagt
ctaacatcaaatgacaccaatggttctgtgggttcgtcacttgatgatatatcaacatcg
gaaaatgaagaagtcaacaaactaactgctgttataacacaaacaggcatatgtaaggag
catgggaaaacatacgccatgttcgctgtcacagtaactcgtcactggggtaatggtagg
caggaatcatgggatactttccgcagataccgagagttttatgaccttcatttaagtctg
aaggaaaatggaagcaacttgagcaccatccgcttccccgggaggactttcttcaaagat
ctaaaggaggacttcttagagaggaggaggacagagttgaaccaatacctcagttctgtt
ctatcacttgaacattgtgggaaagccatggaatgtttacataccttcctggacgcaaag
gcttatcagaaaaatccaagaacttttgcaagcaaaatggactccatgatgcgagaatca
gcgcagagcgtcgccaacttcatgagccaagctccggataaccttataggtggaatacaa
agagcatccgataaagtgtccggaggaattcagaagttttccgataaacttcctggatca
gagaggaaacttagcaatgaggaaaaccacatcgaatataacatcgaaaacaacatcccg
ctgcgaatcctacttctccttatggatgaagtatttgacttgaagcaaagaaaccagtgg
ttacgtcgacagatggttgctgcattacaacaagtcataactactgtgttcggggatcga
atgaacagaaaaatcgtggattacgtggataatgcagtttcagctcagcaggtgagcgag
tacattcggactttccaagactcgttttggccaggtggaatacttgctgatgtcacacca
gttcgtgatgacatcacggtcatgagaactcgtgttctcacaaagaccaaacttcacggc
gtgataccagacgaagtacggccgctcgtcggtaacgagacaagtagacgaggtatggct
cgactgtttgaacttctccaacatcaagagctcaacacgaggttctgttacgttctatta
gaaggtgtgctgtgtcgtgtgttcccagaaaacagatttcaagatctcttcacgaagttt
cactcctcgtcacctaagatgcgctctcacaagagggcacttatgacacgcggagtcgac
aagtggaaacaagaaactcgtgagcgaaagtcgcgcgttctacgtcgtttcgaatcgtga

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