Ciona intestinalis (yellow sea squirt): 100177266
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Entry
100177266 CDS
T01056
Name
(RefSeq) ras-related protein Rab-12-like
KO
K07907
Ras-related protein Rab-12
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177266
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100177266
04031 GTP-binding proteins [BR:
cin04031
]
100177266
Membrane trafficking [BR:
cin04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
100177266
Endosome - Lysosome transport
Rab GTPases and associated proteins
100177266
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100177266
GTP-binding proteins [BR:
cin04031
]
Small (monomeric) G-proteins
Rab Family
Rab12/18
100177266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
SRPRB
AAA_14
TniB
Motif
Other DBs
NCBI-GeneID:
100177266
NCBI-ProteinID:
XP_002120167
LinkDB
All DBs
Position
1:1235825..1239837
Genome browser
AA seq
305 aa
AA seq
DB search
ILVVFEVRLVDLISTKAFKDVVSGRLESVTENGSNHNGNTSNIDIGSTCGATTTYATGEG
GGLRQRRTSEHKKTETTRQRKNSPQKAKGSKDDGSSSPLLQHPTVDLKLQMILIGDRNVG
KTCFLERYTDDLFREESKSTVGIDFRIKTVTVGGRRIRLQIWDTAGQERFNSITTAYYRN
ARGILLLYDVTNPESYRNITKWMKLIEEYGRSDVEVAIVGNKADLENVQVNTHKARNFAE
NCGFIFYETSAKASLNVDTVFVNLIYKILKQIPQPHERNPQIRRKTMTSQALCEDANAKR
SYKCC
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
attttggttgtatttgaagtgaggttggtggatttaataagtaccaaagcttttaaagat
gtcgtctccggaaggctggaaagtgtcactgaaaacggtagcaaccataacggtaacacc
agcaatatagatattggttcaacatgcggtgccacaacaacatatgcaacgggtgaaggt
ggaggtttacgtcagaggcgaacatctgaacataaaaagacagaaacaacaagacaaaga
aagaactccccacaaaaggcaaaaggaagcaaagatgacggaagctcatctccactgctc
caacatccaactgttgatcttaagttacaaatgattctcatcggagacaggaacgtcggg
aagacatgtttcttggagagatacacagatgatttgttccgagaagagtcaaagtccaca
gtcggaatcgattttcgcatcaagactgtcacagtggggggtagaagaataaggcttcaa
atttgggatacagcgggacaagaacgatttaacagcatcacgacagcttattacagaaac
gcacgcggtattcttcttctatatgacgtcacaaacccagaatcataccgcaacattaca
aagtggatgaaacttattgaggagtacggcaggagtgacgtggaagtggcgatcgttgga
aacaaagcggatctggagaacgtacaagtcaacacacacaaagctagaaactttgccgaa
aactgcggcttcattttctacgaaacaagcgccaaagcaagtttaaacgtggacacagtg
tttgttaatctaatatacaaaattcttaaacagatacctcagcctcacgaacgaaatcca
caaatccgacgaaaaacaatgacgtcacaggcattatgcgaggacgcgaacgcgaagcga
agttacaaatgttgctga
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