Ciona intestinalis (yellow sea squirt): 100177358 Help Entry 100177358         CDS       T01056                                  Name (RefSeq) THO complex subunit 2-like   KO K12879   THO complex subunit 2 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03013   Nucleocytoplasmic transport cin03040   Spliceosome Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100177358   09122 Translation    03013 Nucleocytoplasmic transport     100177358  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cin03019]     100177358    03041 Spliceosome [BR:cin03041]     100177358 Messenger RNA biogenesis [BR:cin03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      100177358 Spliceosome [BR:cin03041]  Complex C   Other components    EJC/TREX     100177358  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     100177358 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  100177358 NCBI-ProteinID:  XP_002128581 Ensembl:  ENSCING00000007364 LinkDB All DBs Position 14 Genome browser AA seq 1398 aa AA seqDB search MALGNPQIVKLEICKAWEKTGKNEVIALCKKSMDKPTKRTLKNDIPDIRRVLYECIHHVI AGKLKHDHLISVISELKPTHNAICSTVVDVLSMIDIELVALDEKKLREKFLSLVATLKDE VGIALLKERLDVETLESLKLINSTKLFQQKYIKTKTRLFYKQQKFNLLREEMEGYSKLSV ELGDLSGQRVSPADLLQNIKSLIGCFNIDPNRVLDLILESFECYPEFARQMFIPLVNNYL ILCENSTLCHLLGFKFAHYQTSGSQTPESLYNVAALLIQHNLVCLDDLLPHLLPSDAMIT EEWTKYVETSTEEARRTTVMLLNPAEKPDEKDTKHKKVKQNNQKFGLCEALLKIGDWSHA EELMDRFDHVQMVAQPPIAKALCHLASYIIDPLYINVAEIKGNKCTPTSFEPHHSPPSPV SDFTHLTHGVFSLLYRLGPKAATDPILLVKLARIGKAFFTQYYAANPTDQHKATTIYGGF LGLISNVLLPSLSLLLSNSAASEEIWMMIKLLPYQTRYRLYGEWKNEAYEKHPELLLAKA QIIDKTKYIMRRLTKENVKQTGRQMGKLSHSSPTILFDCILSQIQRYDNLIMPVVDALKY LTNLTYDVLAFCIIEALANPQKERMKHDDTNISNWLQSLASFCGAIFKKYTIELSGLLQY VANQLKAGKSLDLLIMKEVVQKMSGIEISEEITTDQLEALAGGEILKAEGGYFGQIRNTK KSSNRLKEALLEQNLALPLCLLMAQQRQGIVFHEGEDIHLKLVGKLTDQCHDTLVQFGNF LSIQLGSEEYLKRFPAIDVLSSHFHTPADVAFFLSRPMYYHQINTKYDELRKQEKSKQKG VSDKAQRYISASNAVVTPISSLVHSMHSDKIWLDISPRFYTTFWSLTLYDIEVPSSAYDR EIMKLKQTIQGIEQEGSSDSRKRREKERCENLISKLKEEQKKQEDHHGRVRERFRCEKEQ WFLAKTTKNDTITKFLQLCIFPRSIFSPLDAVYCAKFVHMLHEHKTPNFSTLLCFDRVFS DISYTVASLTENEASRYGRFLCTMLGIVKKWHASKGNYEKECGDFPGFVTVLRATAAEGT SKANQLDYENFRHVCHKWQYKLTKALVVCLESKEYTQIRNALIILTKILPHFPAVNSLAG ALEKRIDKIRTEEKEKRPDLFALAMGYSGMLKMRKPSLIPEHQFHKKPQPVASKTTDKSK ERGKSKEKPSKRKTEEKKEKMAEAKSDSNRGKSKDKVIAAGESKSRGSSKERSSLDSSSR HQSLTKMNEKRSSSTPKSVPERDTKRRKLDANHAKEQRIESKEKPDKAKTVEREEGEVNG VNDDPEPKRSRKSKDRKRELVTSPSAGDHVKRHKTESVDRRSKEKEKVRKHESSKIKRES VGDGKKERSSKEVGSRKK NT seq 4197 nt NT seq  +upstreamnt  +downstreamnt atggctttgggaaatccacaaattgtgaagctagaaatatgcaaagcatgggagaagaca ggaaaaaatgaagtaattgctttgtgcaaaaagtcaatggacaagccaactaaacgaaca ttgaagaatgatataccagatattcgacgagttctatacgaatgtattcatcacgttata gctgggaagttgaaacatgatcatctcatttctgtgatatcggaattaaagcctacccac aatgcaatctgctcaaccgtagttgacgtcctttcgatgattgacattgaacttgtggcg cttgacgagaaaaagctcagggaaaaatttctttcgcttgttgctactttaaaggacgaa gttggtattgctttactaaaagaaagattagatgtggaaactttggagtcactcaagctg atcaacagtaccaagctattccaacaaaaatatatcaaaacaaaaacgcgtttattctat aaacaacaaaagtttaatcttctgcgagaggaaatggaaggatattccaaattatctgtc gaactcggagatttgagtggacaacgtgtttctccggctgacttgctgcaaaacatcaaa agtcttattggttgcttcaatattgaccctaatcgtgttcttgacctaatacttgagtcg tttgaatgttaccctgagtttgcacgtcagatgttcattccacttgtgaacaattatctc atactgtgtgaaaactcaactctatgccatttacttggcttcaaatttgctcactatcag acaagtggtagccagacacctgagtctttatacaacgttgcagctcttctaatacaacat aatcttgtgtgtcttgatgatctgctacctcatttgctcccaagtgatgcaatgatcaca gaagaatggacgaagtacgttgaaacatcaactgaagaagcgaggaggacaactgtgatg ctccttaatcctgctgagaaaccagatgaaaaagatacaaagcataaaaaagtgaaacaa aacaaccagaaatttggcttgtgcgaagctttattaaagattggtgactggagccatgct gaagaactaatggatcgatttgatcatgtacagatggtggctcaaccacctattgcaaaa gctctatgtcatctagcttcttatataatagaccctttgtatattaatgttgccgagata aagggtaacaaatgtaccccaacctcctttgaaccccaccattcacccccctccccagta tctgacttcacccacctaacccatggggtgttttctcttctgtatcgtcttggccccaaa gctgctacagaccccatcttactagtcaagctggcaagaattggcaaagcattctttact cagtactatgcagcgaatccaacagaccaacacaaagcaacaacaatatatggagggttt cttggattgatcagcaatgtcctccttccatctctatctctcctcctcagcaactccgca gcatccgaagagatttggatgatgattaaacttcttccttatcaaactaggtacaggtta tatggtgaatggaaaaatgaagcttatgaaaaacacccggaacttttgctcgccaaagct caaattatcgacaaaacaaaatatattatgagacgcttaacgaaagagaatgtaaaacag acaggccgacaaatgggaaaattaagtcacagtagcccaaccattctgtttgactgtatt ttgtcccagattcagcgctacgacaatcttatcatgcctgtagtcgatgcacttaaatac ctgaccaatctcacatatgatgtattagcattctgcattattgaagcgctggccaaccca cagaaagagagaatgaagcacgatgatactaatatatctaactggctacaaagtcttgct tcattctgtggagccatctttaagaaatatacaatcgaactttctggacttctgcaatat gtggctaaccaactcaaagcagggaaaagccttgatcttcttattatgaaagaagttgtt cagaagatgtctggtattgaaatatctgaggaaataaccacagaccaattagaggcattg gctggtggagaaatactcaaagctgagggcggttacttcgggcaaatccggaacacgaaa aaatcttccaacagattgaaagaagctcttctggagcaaaaccttgctcttcctctgtgt cttctgatggctcaacagaggcaagggattgttttccatgaaggagaggacattcatctt aaacttgtaggaaagttaacagaccagtgccatgacactttggtccagtttggaaacttt ctttctattcaacttggttcggaagaatatttgaaaagatttcctgcaattgacgttctg tcctctcatttccacacccccgctgatgtagcttttttcctttcaaggccaatgtattat caccagattaataccaagtatgatgagttacgcaagcaagagaaatccaagcagaaagga gtttctgacaaagcccagcgttatatatcggcatctaatgctgttgtaacgcccatctca tcacttgtacattcgatgcactcagataaaatatggcttgatatatctccacgattctac acaacgttctggtcgttaacattatatgatatagaggtcccatcatcagcatacgaccga gagattatgaaactaaagcaaacgatacaaggcattgaacaagaagggtcgagcgactct agaaagaggcgagagaaagaaagatgcgagaatctaatctcgaagcttaaagaggagcag aagaagcaggaagatcatcatggaagagtcagggagaggttcagatgcgagaaggaacaa tggtttcttgcaaaaaccacaaagaacgacacaatcactaaattcctccaactctgcatc ttcccaagaagtatcttttcacctctggatgctgtgtactgcgcaaagtttgtgcatatg ctgcatgaacataagacgcccaacttctctaccttactatgctttgaccgggtattctct gacatctcatacactgttgcaagcctcacagagaatgaagcatccagatatggaaggttc ctatgcacaatgctcggtattgtgaaaaaatggcatgccagtaaaggaaattatgaaaag gaatgtggggattttcccggtttcgttaccgtattacgagccacagcagctgaaggaaca agcaaagcaaaccaactcgattatgaaaactttcgccatgtttgccacaagtggcagtac aaactaacaaaagcacttgtagtatgcttggagtcaaaggaatatacacagatccgtaac gcacttattattcttaccaagattcttccccatttcccagcagttaacagcttagctggg gcattggagaaacggatagataaaataagaacggaagaaaaagaaaaacggccggactta tttgccctagctatgggttactctggcatgttaaagatgagaaaaccttcattaattcct gaacaccaattccataagaaacctcaacctgtagctagcaagacaacagataaaagcaaa gagagagggaagagcaaagagaagccctctaaaaggaaaacagaggaaaagaaggaaaaa atggcagaggcaaaaagtgattcaaacagaggcaagagcaaagataaggttatagcagca ggtgaatcgaaatcccgtggtagttcaaaagagaggagctccctggattcatcatcacga catcaaagtctcacgaaaatgaacgaaaaacgcagcagttccactccgaagtctgttcct gaacgagatacaaaacgtaggaaactggacgccaaccatgcaaaggagcaaaggattgaa agcaaagaaaaacctgacaaggcgaaaacagtggagagagaggaaggtgaggtgaatggt gtcaatgatgatccggagccgaaaagatcccgaaagagcaaagatcggaagcgggagcta gtgacgagtccttcagctggagatcacgttaaaagacataaaactgaaagtgtggacagg agaagcaaggaaaaagaaaaagtccgaaaacatgaaagctccaaaataaaaagggaatct gttggagatggaaaaaaggaaagatcaagtaaagaggttggcagcagaaagaagtga

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