Ciona intestinalis (yellow sea squirt): 100177371
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Entry
100177371 CDS
T01056
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100177371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177371
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Others
GGA
100177371
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DUF2096_N
TP_0584_N
UPF0242
Cytochrom_C_2
PCRF
Phage_phiTE_211
Motif
Other DBs
NCBI-GeneID:
100177371
NCBI-ProteinID:
XP_002122616
Ensembl:
ENSCING00000007985
LinkDB
All DBs
Position
4
Genome browser
AA seq
691 aa
AA seq
DB search
MADDPNETLETLLNKATSTLNRQDDWEYIMAFCDKVNFEIEGAQNATRLIAHKIQSPQEL
EALRALTVLEACVKNCGEIFQKELGKYRFLNEMIKVVSPKYLGDKTSEKVQKRVLVMLYT
WSIALTDQIKIRDAYQMLKKQGIVTTDPEYDQSMVTDIPAPKESRDTLFTDEEKRKQLDK
LLKSTRPEDLQAANRLIKSVVKEDEDRMEKMKKRNETLEEVTNNIRLLNEMLTHFDPDVT
AISDMQMMKELYDSCHKLRPTLFRLASDTDDDEGALMEILRANDDVTRVMQSFEKIVSPK
LTSVTDRKADGAAEPDKPQPEVEKEISSTLLDLANLNFTPTTSSNDLPATGSTYSSMLLT
PPPNSLQSNNETSMDNMLLDFQSAPTSTSSAPPPTTNDVNSLFSLNDLLPSNPPPQPPTL
APVNPTPMIPKLTAPPQPQQKPSAFSDIDALSRGLMEQTLGHKLQSQFPKPAAKPTLHQL
SQKPVADVPSLFDIPQSQPPQPTTIAPLLPLNPPPTSLPTSEPLIASSNPPPTVMPTQPP
QTQDMSLADVFVALESIRPSTFAPLTVYDKNGIRVMLHFAKDHASPVRTDTLVAVVSIMS
TRTNPVENIVFQAAVPKVMRIKLQPPSNTDLAAFNPILSSPPITQVMIIANPAHKDVKVR
FKLDYKIDDQTSIFETGEINNFPPADQWGKL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaccccaatgaaacactggaaaccttacttaacaaagccacaagcacactg
aatcgccaagatgattgggaatacataatggcattttgtgacaaagttaattttgagata
gaaggggcacaaaatgcaacacggctgattgcgcacaaaatccaatctccacaagaatta
gaagcactacgtgcactgacagtgctggaagcatgtgttaaaaattgtggggagattttt
caaaaagaattaggaaaatacagatttctaaatgaaatgatcaaagttgtttcaccaaag
tatttaggtgataaaacatcagaaaaagttcaaaaaagggttttggtgatgttgtataca
tggagcattgcactaactgatcaaattaaaataagagatgcataccagatgttgaaaaag
caaggtattgttacaactgatccagaatatgatcagtcaatggttactgatattccagct
ccaaaagaaagcagagatactttatttactgatgaggaaaaaagaaaacagcttgacaaa
cttctaaaaagtacccggccagaagacctacaggcagcaaatcgtttgataaagagtgtg
gtaaaagaagatgaagacagaatggaaaaaatgaagaaacgaaatgaaacacttgaagaa
gtgaccaacaatattcgtctgcttaatgagatgctcacacattttgacccagatgtgaca
gccatcagtgatatgcaaatgatgaaggaactgtatgacagctgtcacaaactgcgacca
acattattccgccttgcatcggacacagatgatgatgagggtgctctcatggagatcctg
agagcaaatgatgacgtaacacgagtcatgcaatctttcgaaaagattgtttccccaaaa
ctgacatcggtgactgacaggaaagcagacggagcagctgagcctgacaaaccacaacct
gaagtagaaaaagaaatctcatccactttacttgatcttgcaaatttaaattttacccct
acaacatcatctaatgatttaccagctactggttctacttactcgtccatgctgctaacc
ccacctcctaattcattgcaaagtaacaatgaaacctccatggataacatgctcctggac
ttccaatctgctcccacatccacatcttccgctcctcctccaaccaccaatgatgtcaac
agtttattctcgctaaatgatctccttccctccaacccacccccgcaaccccctaccctt
gcccctgtcaacccaacacccatgatccccaaacttactgcaccacctcaaccacagcaa
aaaccttcagcattctcggacatagatgcactaagtaggggtttaatggaacaaacactt
ggacataaactacaaagtcaatttccaaaacctgcagcaaaaccaacgcttcatcaactt
tctcaaaaaccagttgcagatgttccttcattatttgacataccccaatctcaaccccct
caacccacaaccattgccccacttttgccgctaaaccccccacctacttccttacccact
agtgaacctctcatagcatcaagcaaccccccacccactgtaatgccgacacaaccacca
caaactcaagatatgtcgctagcggatgtatttgtcgcattagaatccatccgtccaagt
acctttgccccactcacggtatatgataagaatggtattcgcgtgatgttacacttcgca
aaggatcacgcctcacctgttagaactgacacacttgtagctgtcgtgtctataatgagc
acacgaaccaacccagtcgaaaatattgtcttccaggcagcagttcctaaggtaatgcgt
attaagttgcaacccccatcaaacactgatctagctgcgtttaacccaatcttatcaagt
cctcctattacacaagtcatgatcattgccaatcctgcacataaagacgtgaaggtccgt
ttcaaactagattacaaaatcgacgatcaaacttcgatatttgaaaccggtgaaataaat
aattttcctccagcggatcagtggggcaagttataa
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