Ciona intestinalis (yellow sea squirt): 100177448
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Entry
100177448 CDS
T01056
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100177448
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100177448
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
100177448
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
BBSome
100177448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_19
TPR_12
TPR_14
TPR_11
ANAPC3
TPR_CcmH_CycH
TPR_17
TPR_16
TPR_15
ARM_TT21_2nd
ARM_TT21_C
TPR_10
ARM_TT21_N
TPR_Slam
Coatomer_E
ARM_TT21_4th
ARM_TT21
PPR_2
NatA_aux_su
PPR
ChAPs
DUF5858
Motif
Other DBs
NCBI-GeneID:
100177448
NCBI-ProteinID:
XP_002125730
Ensembl:
ENSCING00000009382
LinkDB
All DBs
Position
3:complement(3556614..3564292)
Genome browser
AA seq
537 aa
AA seq
DB search
MDSTADIPLPSASAVVKPKPRRKKAPSLPAVERRNWLIHTHYVRKEWQTCKTLIQEQLKE
TNGQCEYAVYIQAMIMRSEGWIQQSMELFQACHLLNPTNPDNLKQIARNLILLGKHKSAI
ECYNRASELSERDWDICHCLGLCYHFLKDYDKAEQCFIESLKLNRHTVTYNMLAKLYLET
GNHDKAMDVLSKGVEFSPENTDLLTLLGLLHLRKSSFHKAFELLGQAMTFDQENYKAILA
AGSMMQKHGDFDVALSKYRVAAQAVPESSSLWNNIAMCFFGKKKYVAAISCLKRANYLSP
FDWKILYNLCLLHLTMQQYASAFHFGSTAISLKQDHGPLYMLLAVALTNLGQEENAEKAY
EEAIRLNGSDIHTVLNYCVFLHNRSKSKQAAKLLSSLQKNMPTDKADINKEVIELNKKLT
AALNVGDKIVAEKEKSEKKKKQKDKAPKTSTPNPFSPTSAQPPPNEIDGMPSPATSSLPS
VVQSKLPPLRSRPSGEIKPPKYDITKPDTDDDVLSRLPTAPTHDPYAGKPTRKAVAE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacagtactgcagacataccgttgccttctgcttcagctgtagttaaacctaaacca
agaagaaagaaagctccttccctgcctgctgtggaacgccgtaactggttgattcataca
cattatgtgagaaaggagtggcaaacatgcaagacactcatacaggaacaactaaaagaa
acaaatggtcaatgtgaatatgctgtgtacattcaggccatgataatgagatctgagggt
tggattcaacaatccatggaattatttcaagcgtgtcatctgcttaacccaaccaaccct
gacaatctgaaacagattgctagaaatttgatactgcttggcaagcataaaagtgcaata
gaatgctacaatcgtgcttctgaattaagtgaaagggattgggacatatgtcattgcctt
ggattgtgttaccacttcttaaaagattatgacaaggccgagcagtgctttattgaatca
ttgaaacttaacagacatacagttacatacaatatgctcgcaaagctttaccttgaaaca
gggaaccatgataaagctatggatgtattaagcaaaggggttgaattctctccggaaaat
actgatctgttaactttgttggggttgttacacttgcgcaaatcaagcttccacaaagca
tttgaactccttgggcaagcaatgacttttgaccaagaaaattataaggctatccttgct
gcaggctccatgatgcagaaacatggagattttgacgttgctttgtctaaatacagggtt
gctgctcaagctgtgcctgaaagttcctcattatggaacaacattgcgatgtgcttcttc
ggcaaaaagaaatacgtagctgctatcagctgtttaaagcgagcgaactatctttcacca
tttgattggaagatcctatacaacctctgtctgctacatctaacaatgcaacagtatgcg
agtgcttttcactttggtagtactgccattagtttgaaacaggatcatggaccattgtac
atgctccttgctgttgctttgactaaccttggacaagaagagaatgcagagaaagcttat
gaggaagcaataaggctaaatggatctgacatccacacagtacttaactactgtgttttc
cttcataatcgatccaagtctaaacaagcagcaaaacttctttcatctttgcagaaaaac
atgccaacagataaagccgatataaataaagaggtaattgagctgaacaagaaattgaca
gctgcgttaaacgttggggacaaaatagtcgcagagaaagaaaaaagtgaaaagaagaag
aaacaaaaagacaaagcacccaagacctccactcctaaccccttttccccaacaagcgcc
caacctccaccaaatgaaattgatggcatgccatctccagctacaagttcactacccagc
gtggttcagtccaagttacccccactacgctcacggccatctggtgaaatcaaaccaccg
aaatatgacatcaccaaaccggacacagatgatgatgtattgtctcgcctaccaactgcc
ccaacacacgatccatatgctgggaagccaaccagaaaggctgtggcagagtaa
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