Ciona intestinalis (yellow sea squirt): 100177454
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Entry
100177454 CDS
T01056
Name
(RefSeq) transcription factor Sp5-like
KO
K09195
transcription factor Sp5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
100177454
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
100177454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
zf-C2H2_6
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_2nd
Motif
Other DBs
NCBI-GeneID:
100177454
NCBI-ProteinID:
XP_002120430
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MLSPNMTSPALPGFVKKQSPQQPCHVIQSRPNFHTPQRVYQPWLMDAESTLHPHPAIAPH
PTPRCMITATGSVCNRMMDLPPTPPSTDAFHPYQQQFYRGNIPEASSITSQSCGYRHDVT
PPVSHVTADVTMRCFNARFYQQLSPPLEPDSWWRSQRQYAASNERLATHNPLASRSIVPH
MLPNQTAPTYDPFIPGLCARSAHRAALLAIGDHFASSSVTRRCARCRCPNCVAPNDLRNA
NGKKEHICHFPNCGKVYGKTSHLKAHIRWHLGERPFVCHWMFCGKSFTRSDELQRHLRTH
TGEKKFRCTICEKRFMRSDHLSKHVKIHQKKSNIEKTAKTTEISQTKSPVKKTDDVKEDA
YFAT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtcctaatatgacttcccctgcacttcctggatttgttaaaaagcaaagccct
caacaaccttgtcacgtcatccaaagtcgccccaactttcacaccccacaacgagtttac
caaccatggttgatggatgcggaatccactctacacccccacccagccatcgccccccac
cccacaccacgctgtatgataactgctacagggtcagtttgcaaccgaatgatggacctt
ccccccaccccaccatccactgacgccttccatccttaccaacaacaattctaccgcgga
aatattccagaagcatcttctattacgtcacaatcatgtggctacagacatgacgtcact
cccccagtatcccacgtcaccgctgacgtcacaatgcgttgtttcaacgcgcgattttac
cagcaactctccccaccccttgaacctgacagttggtggagaagtcaacgacaatatgca
gcaagcaacgaacgacttgccacccacaacccactagcctcacgtagtattgtccctcat
atgttgccaaaccaaaccgcaccgacatacgatccatttattcccggcttatgcgctcgc
tcagcacacagggcagctttgttagccatcggcgaccattttgcttcgtccagcgtcaca
cgaagatgcgcgagatgtagatgtccgaactgtgtcgcaccaaacgacttaaggaacgct
aacggaaagaaggaacacatttgtcactttccaaactgtgggaaagtttatggaaaaacg
tcgcatttaaaggctcatataagatggcatcttggtgaaaggcctttcgtttgtcattgg
atgttttgcggaaaaagttttacaagaagcgatgagttacagcgccacctaaggacgcat
acaggagagaaaaagttccgttgtacgatttgtgaaaaacgtttcatgcgatcagatcat
ttatccaaacacgttaaaattcatcagaaaaaatctaacatcgaaaaaactgctaaaacg
accgaaatttcccaaacgaaatcaccggttaaaaaaaccgatgacgtcaaagaagacgcg
tacttcgctacctag
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