Ciona intestinalis (yellow sea squirt): 100177509
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Entry
100177509 CDS
T01056
Name
(RefSeq) rho GTPase-activating protein 45 isoform X1
KO
K26415
Rho GTPase-activating protein 45
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177509
Membrane trafficking [BR:
cin04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
100177509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
RHG29_45_N
GMIP-like_FCH
FCH
Motif
Other DBs
NCBI-GeneID:
100177509
NCBI-ProteinID:
XP_002130950
LinkDB
All DBs
Position
8:5035111..5050931
Genome browser
AA seq
1249 aa
AA seq
DB search
MKAAFRHDDSLDSTGSGGSFNLPQNNFALVGQDAGNEIPVNSNRMDNQQNSGSGSSTDVG
WTGDSKAADTRLMSQEGVFQLTKDLRTFSEALTALKSVFLDERNSSDKSQRVLAHERLGE
LLQVLKMVVDKYAELNSTEILSMAGVLIRHVKEYNYEDDRLDASPDIFRAINNLAMAFSN
SVSECLMGDVHISPRLSMTSSHSFDTFEASDQRTESIENPPEIPTTEVPSSENTSSEHAD
ELLQRMDAGLEMAFERAKILSKYLSDLMTYVKKKAHLEMEHSKSLLKLSQATKPILSEQS
FLPFQSLYCTALDHDREYGSNSHTMYQAQILQQKFLEPLQAKKSQHDKRRKTIRDTWNKE
KRRSEEAILNMKKAKQTYQVKIQEYHKAKEAAIKAETEQSQQSNPSHPAKHGAVSQTTTL
GSVLYSAAASGKMEKKKRQEEDTNLKATQAEHNYKAYVMEANKRLRDLERNKVHYLQQLR
DLMTQCDQTAQSVTISYFQLHQQLFSPLPVQFQAMCEDAKRYEPGFQYTEYIRNLPSQPY
HIRSDFEFEQVSVDGAPYLVSGRSMETDDYHGKSTSQGHHRTKGLSDTESSSSRSLDDIS
PSASPGDLTRATHGSRRLSNAGSLSSEENLADKDVPGSNLAIPAEHGGLGPTPESSPVPY
RHQTSKPASKIATMAANVQRAFKSKKSSKSSLFGVEFSVATQDVPDGIPYLVKRCIAEID
NRALNAKGIYRVNGVKNRVEKLCTQFDLSADRVDLSQQSPHDVSGVLKYFLRQLPEPLMQ
FNLYPTFLDIAKDYQQVITSTNEAMAQAKEANLPMPDPPTRAFLDSFVLRLKETVETLPL
PNRNTLQYIISHLTRIASQSHDNKMTANNLAIVFGPTLLRPQLTDGNESLKTLIDMPYQS
RIVELLLIHKDAIFGTHTHTAGNIFPFAGFHHTPSSYSVDEGSTEPENDGITASLRQVTL
IAEGTNKSSDEVSHEGDILLNFDDDVPIEAPQASNASGSDVHILPLTDCGEIIRDSSGVN
NIDMKTNLNGSSQNSGLEGGKLNSMKQRPNLLNLHTSSTESEPNLLDFSPKTGLTPLTEN
AICNDVQIPVVPARNRSRKTSANRTEGAKPDELLSGGDAENLSNLSESLYSSMSRRISIS
SVSKITKNLGRRPPLLKSGSFDSLACPLEPKVSDQQPRSRKLPTIPAHVSGTNSAYYMAG
RTPPQPSMGQKSSSFSLSLPNPDTSAPAAKRGILLDDFKSNEEKEGSFC
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagcttttcgtcatgacgacagtctcgatagcactggtagtggtggaagtttc
aatcttccgcaaaataactttgcgcttgtcggacaagatgcaggaaatgaaattcctgta
aattcaaacaggatggacaatcaacaaaacagtggaagtggttcttctactgatgtgggt
tggactggagattcaaaagcagcagacacacgtctaatgagtcaagaaggagtgtttcaa
ctaaccaaggatctaaggaccttctctgaggctttaactgccctgaaatctgtgtttctg
gatgaaagaaattcatccgacaaatcccagcgagttctggcacatgagcgactaggggag
ttactgcaggtgttaaagatggtcgtggataaatatgctgaacttaattcaacagagatt
ctctccatggctggggtgttgattagacacgtcaaagagtataactatgaggatgacaga
cttgacgcttctccggatatttttagagcaatcaacaatcttgccatggcattcagcaac
agtgtatctgaatgcttgatgggagacgtacatatcagtccacgattatccatgacttct
tctcattcatttgatacttttgaagcaagtgaccagaggacagaatcaattgaaaatcct
ccagaaatcccaaccactgaagttccaagctctgagaatacttcatctgaacatgctgat
gagcttttacagcgcatggatgcaggactggaaatggcgttcgagcgagcaaagatattg
tccaaatatctcagtgaccttatgacttatgtgaagaagaaagctcatctagaaatggag
cattctaagagcttgttaaagctgtcacaagccaccaaacccattctttcagagcaaagt
ttcctaccgttccaatctctttactgcactgcacttgatcatgatcgagagtacgggagt
aacagccatacaatgtatcaagcccaaatcctacagcagaagtttctggagcctttgcaa
gcaaagaagagccagcatgataaacggaggaaaaccatacgtgacacttggaacaaagag
aaacgaagatcagaggaggcaatactaaacatgaaaaaagcaaagcagacgtatcaagtt
aaaatccaggagtatcataaggcaaaggaggcagctattaaagctgaaactgagcaaagt
cagcagtctaacccttctcatccggcaaaacacggagcagtttctcaaactacgacactc
ggatcagttctttactccgctgctgcatccgggaagatggagaagaagaagaggcaagaa
gaggacacgaatttgaaggccactcaagctgaacataattacaaagcttacgtcatggaa
gccaacaaacgcttgagagatcttgaaagaaacaaggttcattaccttcaacaactacga
gacctgatgacacaatgtgaccaaacagcacaaagtgtcacaatcagttacttccaactc
catcaacaattattctcacctttgcctgtacagtttcaagcaatgtgtgaagacgcgaag
aggtacgaacctggctttcaatacacggaatatatccggaaccttccctcacaaccctac
catataaggtctgactttgagtttgagcaagtctcggtggatggagcgccttaccttgtt
tcaggtcgttcaatggaaacagatgattaccatggaaaatccacatcacaaggccatcat
agaactaaaggtttaagcgacactgagagcagcagcagccgatctctcgatgatatttcc
ccatctgccagcccaggtgacctaacaagggcaacccatggcagcagaaggctttccaac
gccggctccttgtcttcggaggaaaatcttgctgataaagatgtccctggatccaaccta
gctatccccgcagagcatggtggacttggtccaacccctgagagttctcctgtaccttat
agacatcagacatcaaaaccagcgagcaaaatcgcaacaatggctgctaatgtgcaacga
gcctttaagagtaaaaagtcgtcaaaatcttctttatttggagtggagttttctgttgcc
acacaagatgtgcccgatgggattccttaccttgttaagcgatgtattgctgagattgac
aaccgagctcttaatgcaaagggtatttaccgggtaaatggggtcaaaaatcgtgtcgag
aagttgtgcacccaatttgacttgtccgcggaccgagtcgacctttcccagcagtcgcca
cacgatgtcagcggagtgctcaagtattttcttcgtcaactaccagagccactaatgcaa
ttcaacctttatcctactttccttgatatagcaaaggattaccaacaagtgatcacttca
accaacgaagcgatggctcaagcaaaagaagcaaacttaccgatgccagacccccctacc
cgtgccttcctagattcatttgttcttagattaaaagaaacagttgaaacgttacctctg
cctaaccggaatacacttcagtatataatatcccatcttacaagaattgcctcacaatcg
cacgataacaagatgacggcaaacaaccttgccattgtgttcggtccaactctgttacga
ccgcagctcacggatgggaatgagtcattgaaaacactgatagacatgccgtatcaatcg
cgtatagtggaattactacttatccacaaggatgcgatatttggcacacacactcacaca
gctggtaatatcttcccgtttgcaggcttccaccataccccatcatcatatagtgttgat
gaaggctccacggagccagaaaatgacggcatcacggcctcattgagacaggtcactctc
atagcagagggcactaacaaaagctcggacgaggtgtcacacgagggcgatattctactc
aattttgacgatgatgtccccatcgaagcaccccaggcgtccaacgcgagtggttcggac
gttcacatcctgccactaactgactgcggagagatcattcgagatagctctggtgtgaac
aacattgatatgaaaactaacctcaatggatcaagtcaaaacagtggattagaaggtgga
aaactaaattcaatgaaacagcgacctaacttgctaaatcttcatacaagtagcacagaa
agcgaacctaatttacttgatttctctccgaagactggattaactccactcacggaaaac
gcaatctgcaacgacgtgcaaatccctgttgttccagcccggaatcggtcgcgaaaaact
tctgctaatcgaactgagggagcaaaacccgatgaacttttaagtggcggagatgctgaa
aacctctccaacttgtctgagtccttgtattcttccatgtctcgccgtataagtatatct
tcagtttccaagatcacaaaaaatcttggcagacgacctccccttttgaagtcaggcagc
tttgattctttagcttgccctttggaaccaaaggtgtcagatcagcagccacgatctagg
aaactgccaactattccagctcatgtttctggaactaactcagcttactatatggcaggc
aggacccctcctcaacccagtatgggccagaagtcgtccagtttctctctatcacttcct
aaccctgatacttcagctccggcagcaaaacgtggaattcttcttgatgattttaaatca
aacgaagagaaagagggttcattttgctga
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