Ciona intestinalis (yellow sea squirt): 100177539 Help Entry 100177539         CDS       T01056                                  Name (RefSeq) calnexin isoform X1   KO K08054   calnexin Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04141   Protein processing in endoplasmic reticulum cin04145   Phagosome Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     100177539  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     100177539  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03110 Chaperones and folding catalysts [BR:cin03110]     100177539    04131 Membrane trafficking [BR:cin04131]     100177539   09183 Protein families: signaling and cellular processes    04091 Lectins [BR:cin04091]     100177539 Chaperones and folding catalysts [BR:cin03110]  Other chaperones and cochaperones   Calnexin / calreticulin    100177539 Membrane trafficking [BR:cin04131]  Endocytosis   Clathrin-mediated endocytosis    Others     100177539  Autophagy   ER-phagy    Other ER-phagy associated proteins     100177539 Lectins [BR:cin04091]  L-type lectins   100177539 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calreticulin PFF1_TM Connexin MAP17 DUF4834 PA26 Zip NPR3 V_ATPase_I Motif Other DBs NCBI-GeneID:  100177539 NCBI-ProteinID:  XP_026691805 LinkDB All DBs Position 9:4015664..4021479 Genome browser AA seq 572 aa AA seqDB search MWKVITLVLCFGLVCAQESTGPTYVTPVPSGNVFIDEPFDSDDALESWTQSQATKDGVDS DIAKYNGNWAVEGLAENALPGDLGLVLKGKAKHHAIAASLDTVYKFEGKPFIMQYEVNFQ TGIECGGAYVKLLTHSDGLDLSDFRDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEIE EKHANKPTTDFKSYYTDKASHLYTLVINPDNSFQVLIDQTVINSGNLLTDFTPPVVPPKE IEDKDDKKPEDWDEREMIPDPDATKPDDWDETAPARIVDSDAEMPEGWLEDEPLYIPDPD ASMPEDWDEEMDGEWEAPKVDNPKCAEAAGCGTWEPPMIDNPEYKGIWSAPEIANPAYKG IWKPRMIPNPGYFEDELPYKMSPIGAVGFELWSMSEDIYFDNILITDDREVADDYAEKTW KLKKQIRAEKEPSFVQGLLSATEEKPWLWIIYVLVVGLPAVLLFAFCCGGKKKADPKKTD EATPDDPHESENEDENDKEEEKEEDGEASQDENKEEASQEEEEAATEETGDGDKLTKEDL EKDDDEIQALEDDNSPVNSRRSPRKRKPRVQD NT seq 1719 nt NT seq  +upstreamnt  +downstreamnt atgtggaaagttattacattggtattgtgttttggattagtttgtgcacaggagtctacg ggtcctacctatgttacaccagttccaagtggaaatgtgttcatagatgaaccatttgac tcagatgatgcattagaaagttggacacagtcacaagccactaaagatggagttgattca gatattgctaaatataatgggaactgggcagttgagggtctggctgaaaacgcattgccc ggtgatctaggtcttgtactaaaaggcaaagcaaagcatcatgctattgcggcaagcctt gacacagtctataaatttgaaggcaaaccattcataatgcagtatgaggtaaattttcaa actggaattgaatgtggaggagcatacgtgaaactgctgacacattcggatggtttggac ttgagtgatttccgagacaagacaccatacacaatcatgtttggccctgataaatgtgga gaagattacaagttacacttcattttccgccacaaaaaccctaaaaccggtgagattgag gagaaacacgccaataaaccaaccacagacttcaaatcttattacacggataaagcatcc catctttacacacttgtcatcaacccagacaattcattccaagttcttattgaccaaact gtgattaattctggaaatcttttgacggatttcactcctcctgtcgtaccaccaaaggaa attgaagacaaagatgacaagaagccagaagattgggatgagagagagatgatacctgat ccggatgcaacaaaaccagatgattgggatgaaactgctccagcaagaattgttgattca gatgctgaaatgccggaaggttggcttgaagatgaacctctttacatacctgatccggat gcgagtatgccagaagattgggatgaggagatggatggagaatgggaagctcctaaggtc gataatccaaaatgtgcggaggctgctggttgtgggacatgggagccacccatgattgac aaccctgaatacaaaggtatatggtcggctcctgaaatagcaaacccagcatacaaaggt atttggaagccaaggatgatcccgaaccccggctactttgaagatgaattgccttacaag atgtcaccaattggagcagttggcttcgaactgtggtccatgagcgaggatatttatttc gacaacatcctcatcactgatgatcgtgaagtggctgatgattacgcagagaagacctgg aaactgaagaagcaaattcgagccgagaaagagccaagctttgtacaaggactgctttca gcaactgaagaaaagccgtggttgtggatcatttatgtgctggtggttggactgccggct gtgctgctctttgctttctgttgcggtggtaagaaaaaggcagatcctaagaagactgat gaagccacaccggatgacccacacgagtctgaaaatgaagatgaaaatgacaaggaggaa gaaaaagaagaggatggagaggcttctcaagatgaaaacaaggaagaagcaagtcaggaa gaggaagaagctgcaacagaggagacaggtgatggagataaattaactaaagaagatctg gagaaagatgacgatgaaattcaagctcttgaagatgataatagtccagtgaacagcagg cgttccccaagaaaacgaaagcccagagtacaagattga

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