Ciona intestinalis (yellow sea squirt): 100177589
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Entry
100177589 CDS
T01056
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cin01100
Metabolic pathways
Module
cin_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100177589
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100177589
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
100177589
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
100177589
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100177589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Tropomyosin
Spc24
Motif
Other DBs
NCBI-GeneID:
100177589
NCBI-ProteinID:
XP_002130454
Ensembl:
ENSCING00000000334
LinkDB
All DBs
Position
14:2024013..2031092
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AA seq
517 aa
AA seq
DB search
MVSKRLLLRFITVVIIVALFLIMLDVSVPYLRRVAEDQKITGSWGNQLKWSEKFEQSDKI
IRSLQHQIQDLESALETKKSQLIKIEEQKEEISTEESNPLYMDGDKVLHFLHEQISKARV
LKGQRLRNEYSVNEFRMFDRTFVYKMDLGLKQRPQDVISSRYDWNSEFPGVINFGVESLN
SGGRRLEVTPTYRFTEKDFVHGLSRTEAGMGVHYELVYKPISSANLPKDIKLFYVTVFRP
LAPPKAIQTRSSPTSETVHFIVPLQNRIDTFQMFMKYFDDTIQVDHNVHLTVVYFGKVGL
YSLNQDMEEFRNKTGFTQFSVVSVLNEEFSRGKALQKGVNSLTVKNPLLFFCDIDIAFSP
EFLTQCRSHSQAGVSVFYPVVFSLYNPNVVFDKDKVPELRDRQVIKNNYGFWRDFGFGMT
CQYKSDFVEIGGFDLNIRGWGTEDSLLYRKFSQSNLQVIRTPVNTLFHHWHPKECDASWA
KEQYESCLKSRARTEGSMKDLGLLYFKMKESLEKKDS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcaaaaaggctgcttctgaggtttattaccgttgtaattattgttgcattgttt
cttattatgttggatgtctctgttccttatttaagaagagttgcagaagatcaaaagatc
acaggttcatggggtaatcaactaaaatggagcgaaaagtttgaacaaagcgacaagatc
ataagaagtctacaacaccaaattcaagatttggaaagcgctctggaaacaaagaaatct
cagttaatcaagatagaagaacaaaaggaggaaatttctacagaagaaagcaacccttta
tacatggatggtgataaagttttgcattttcttcatgaacagatttcaaaggcgagagtt
ttaaaagggcaacgtcttagaaatgaatattcagtgaatgagtttcgaatgtttgacagg
acttttgtgtataagatggatttggggttgaagcagagaccccaagacgtgatctcgtct
cgatacgactggaattccgagtttcccggtgtgattaactttggggtggaaagtttaaac
agtggtgggcgtcgccttgaggtcacgcctacttaccggttcactgaaaaagattttgta
catggtttatcacgaacagaagcaggcatgggtgttcactatgagcttgtatacaaacca
atatcaagtgccaacctacccaaagatataaagcttttttacgtgactgtatttcgacca
ctggctccacccaaagccattcaaaccaggtcatcacccaccagtgaaactgttcacttt
attgttcctttacagaacagaattgacactttccagatgttcatgaaatattttgacgac
acaatacaagtggaccacaacgttcacttaactgttgtttactttggaaaagttggtctc
tattctttaaatcaggatatggaagaatttcgcaataaaaccggttttacccagtttagt
gtggtcagtgttttgaacgaagaattcagtcgtggaaaagcattgcaaaaaggcgtcaat
tctctcacagtgaaaaatccacttctgtttttctgtgacattgacattgcattttcgcca
gaatttttgacccagtgtaggtcacatagccaagcaggagtttcagtcttctaccctgta
gtattcagcttatacaacccaaatgttgtctttgataaagacaaggtgcccgaattacgt
gacagacaagttattaaaaacaactatggattttggagggatttcggttttggaatgact
tgtcagtacaagtctgattttgtggaaataggtggttttgatctaaacatacgtggatgg
ggaacggaagactctttgttatacagaaagttttctcaaagcaatctacaagttatacga
acaccagtgaacacattatttcatcattggcatcctaaggaatgtgatgcatcttgggct
aaagaacaatatgaatcatgtttaaaatctcgtgcgagaactgagggctccatgaaagac
cttggtctgctttactttaaaatgaaagaaagtcttgaaaagaaagactcataa
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