Ciona intestinalis (yellow sea squirt): 100177674
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Entry
100177674 CDS
T01056
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3-like
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00230
Purine metabolism
cin00670
One carbon pool by folate
cin01100
Metabolic pathways
Module
cin_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
100177674
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
100177674
Enzymes [BR:
cin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
100177674
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
100177674
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
100177674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp_3
ATP-grasp
ATP-grasp_2
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-GeneID:
100177674
NCBI-ProteinID:
XP_009860477
Ensembl:
ENSCING00000007699
LinkDB
All DBs
Position
12:complement(2594894..2607785)
Genome browser
AA seq
1023 aa
AA seq
DB search
MARILVVGSGAREHCLSWKLKQSEKVDVVFVAPGNGGTQKEQDSLISGNDIPDVNNFTAL
AVWCQKNQINLVVVGPEIPLSEGIVEVMQEHGVLCFGPSSKAAEIESNKSFAKEFMIRHG
IPTARYEIFTDCETACHHINTAPYRALVVKASGLAAGKGVVVAKNKIEACEAVRNMLNNG
QFGDAGSTVVVEELLEGEEFSILCFSDGCHVKVMPPVQDNKRVGEGNVGANTGGMGAYCP
CPQVSEEMVQFIKSEVLERAVRGLNLEGRTFKGILYAGVMVTKDGVKVLEFNCRFGDPEC
QVILPLLETDLFSIMMSCVKGHLNSIDLQWRQNSFSVAVVICSRGYPGVCEKGKIITGLE
NITSSDAVIFEAGTSYDSAASQKVTSGGRVLTVVATTKSLEKSNEKALDAAGKIVFEGAF
YRRDIAKNGINFLERNPNLTYDNCGVSIKKGDSLVKQISSDVRNTARPGSNPELGGFGGS
FDLEKAGYKNPMLVSGTDGVGTKLLLAQKMKKCCDIGVDLVAMCANDVLTHNAESLFFLD
YYACGSLTLDVAREVVSGIARGCKMAGCALIGGETAEMPGVYPTGSYDLAGFVVGAYEKG
RDRPLPCLEEVIPGDVIIGVMSSGIHSNGYSLVRRVVEISGLELNDPAPFEEGKSLGESL
LTPTAIYSKLLLPVLRSTNQIRAVAHITGGGIVGNLKRVLPSNMAAILDARSWPLQSVFG
WIASVGNLHTDEMLKTFNCGLGLCIVTSQSTADDVIMKCNDALSSINLKSYKVGKVVLKK
ENTESVAVNHLTEMLYKSYSHKTPKLTNGIASGDHGKNGSKTSVAILISGTGSNMQALID
HSTHNECLYQVKFVISNKPNAPGLLKAQSAGILTKVIDHKEFKTRELFDRQVDAALTINN
IEIICLAGFMRLLSGWMVKKWRGQILNIHPSLLPLFKGIDAHKQALDAGVRISGCSVHFV
VEEMDEGAIIEQGTVRVEPKDDITSLQEKIKLVEHKVFPKALDLVATGMASLHSSKNKVV
WKN
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaattttggttgttgggtctggagctcgggaacattgtttatcatggaagctt
aaacaatcagagaaagttgatgttgtgttcgttgcccccggtaatggtggtacacaaaaa
gagcaagacagtctaatttctggaaacgatatcccagatgtaaataattttacagctctc
gctgtttggtgccagaaaaatcaaattaatcttgtggttgttgggccagagatcccgcta
tctgaaggaattgttgaagtaatgcaagagcatggtgtcttgtgttttggtccatcttca
aaagctgcagaaattgagtcgaataaatcatttgcgaaagaatttatgattcgtcatggc
attccaactgctagatatgagatattcacggactgtgagaccgcctgccaccacatcaat
actgctccttatcgcgctctagtggtcaaagcaagtggtcttgccgctggaaaaggagtt
gtcgtagcaaaaaacaaaattgaggcttgtgaggctgttagaaatatgctaaataatggt
cagtttggagatgcaggttctactgttgtggttgaggagttacttgaaggggaggagttc
tccattttatgtttcagtgacggttgccatgttaaagttatgcctcctgtccaggataac
aagagagtgggggaggggaatgttggggcaaatactgggggaatgggggcttactgccca
tgcccacaggtgtctgaggaaatggttcaatttataaaaagtgaggttctggagagagct
gtgcggggtttgaacctggaaggtcggactttcaaaggaattctttatgctggggtgatg
gttacaaaggatggggtcaaagttttggaatttaactgtagatttggtgacccagaatgt
caggtcattcttccccttctagaaactgatttattttccattatgatgtcatgtgtcaaa
ggtcatctgaactctattgacctccagtggagacaaaactcgttttcagttgctgtggtt
atttgtagtagaggttacccaggagtttgtgaaaaagggaaaattattacaggattggaa
aacattactagcagtgatgctgtaatttttgaagctgggacatcatatgacagtgctgcc
agtcaaaaagttacatctggtggtagagtgttgaccgttgtagctacaactaaatccttg
gaaaaaagtaatgaaaaagcattagatgctgcaggaaaaattgtttttgaaggagctttt
tatagaagagacatagccaaaaatggaataaatttcttagaaagaaatccaaatttaacc
tatgacaactgtggagttagtatcaaaaaaggggattccctggtcaagcaaatatcttct
gatgttagaaacacagcaagaccaggttcaaatcccgagcttggtggtttcggtggaagt
tttgaccttgaaaaagctggttacaaaaatccaatgctggtatctggtactgatggagtg
ggaacaaaattattgcttgctcaaaagatgaaaaaatgttgcgacattggagttgacctt
gttgctatgtgcgctaacgacgtgctgactcataacgctgagtcattgtttttccttgat
tactatgcgtgcggctcgctaacactcgatgtcgcaagagaggttgtatcaggaatagca
aggggatgtaagatggcaggctgcgctctgattggtggggaaactgctgaaatgcctggt
gtgtatccaactggtagttatgatctcgctggttttgttgttggtgcatacgaaaaggga
cgtgatcgtcctttaccctgccttgaagaggtcatacctggtgatgtcatcattggcgtg
atgtcatcaggtatccatagcaacgggtatagcttggttagaagggtggtggagataagt
ggattggaattgaacgacccagctccatttgaggaaggaaaatcgctaggcgaatcactt
ttgacaccgactgccatctacagcaagctacttcttccagtgcttagatcaaccaatcag
attcgagctgtggcgcacatcacagggggtggaattgtgggtaatttaaaacgagtgttg
cctagcaacatggcagccatattggatgcacgttcttggcctctgcagtcagtgtttggt
tggatcgcttcggttggaaatcttcatacagatgaaatgttaaaaacttttaactgtggt
cttggtctttgcattgtgacatcacaatctactgccgatgatgtcataatgaaatgcaac
gatgctctttcttctattaacctcaagtcttacaaagtggggaaggttgttttaaagaaa
gaaaacacagaatctgtagctgtcaatcatcttactgagatgctttataaaagctacagt
cacaagactcctaaactgaccaatggaattgcttctggtgatcatggaaaaaatggaagt
aaaacttcagttgccattttaatctctgggacaggaagcaatatgcaagccctaatagac
cacagtacacacaatgaatgcttgtaccaagtgaaatttgttatttcaaataaacctaac
gctccaggattgctcaaagcacaatctgcagggattcttacaaaggttatcgaccataaa
gagtttaaaactcgagaattgtttgaccggcaagttgatgctgctttgacaataaacaac
atagaaatcatatgtttagctggatttatgcgacttttatcaggctggatggttaaaaaa
tggagaggacaaattttgaacattcatccaagcttgctccctctatttaagggaatagat
gcacataaacaagctttagatgctggtgtcagaatatctggttgctccgttcactttgtt
gtggaagaaatggatgaaggagctattattgagcaagggactgtgagagttgagccaaaa
gatgacatcactagtttacaggagaaaataaaacttgttgaacacaaagtgtttcctaaa
gcccttgatctagtagctactggcatggcttctttacacagtagtaaaaacaaagttgtg
tggaaaaattga
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