Ciona intestinalis (yellow sea squirt): 100177678
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Entry
100177678 CDS
T01056
Symbol
nachr
Name
(RefSeq) cholinergic receptor, nicotinic, beta precursor
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100177678 (nachr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100177678 (nachr)
Ion channels [BR:
cin04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100177678 (nachr)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF685
Motif
Other DBs
NCBI-GeneID:
100177678
NCBI-ProteinID:
NP_001232930
UniProt:
E7FIZ3
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All DBs
Position
7:4700347..4710815
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AA seq
506 aa
AA seq
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MTTTVLIVILFCLLDLSASLKNSTFFSKEAELVSILLDGYSARVRPRDKNGKTKVNVGIT
LSQIMSLSEKSEVMMSSMYMTYTWVDPRFSWNESKYDGILVTRISVDRIWVPNIIIKNSK
ERNLKESLRVNALVFHNGSVQWLPPAIYKTSCTMDVTLFPFDWQNCSMVFRSADHDQSEM
IFGLSYGSSIWVDKHVYIKNGEWVLYQKPAYVVKKKSDEQFQEVWFTVILCRKPQFYVLN
MLLPCVMISILSCFVFHLPVVAGEKIGLSISLLLGDTIFVFLFAQRMPSTALTVPHVATY
LLFSMILLFLSIFCCVVVYNFHFRSNVTHEMPRVWKWLFFDKFAPLLGLQQPHRKEKVQS
NKFAETSSSRNDFIAKTISQNYMMQKSPSEQMYLTQAPLYGFRSRQKRLVDINGGLSAIP
IAIKPVSESIKTALRETENVTAHFKKIKAQRRARHDWIYLAFILDRLLMWLYMFAFVVGS
LSFVVLVATENYPENIVAAENDMKDL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgacggtgttgattgtgattctcttttgtttgttggatttgagcgcatcttta
aagaattcaaccttcttctcaaaagaagcggaacttgtctctattttgttggacggctac
agcgcacgggtacgcccccgagataagaatggtaaaacaaaagtgaacgttgggataact
ttaagccaaatcatgagtttgagtgaaaagtcggaagtgatgatgtcatcgatgtacatg
acgtatacttgggtggacccgaggttctcatggaacgagagtaaatatgatggaatactt
gtcaccaggatttcagtggatcgtatttgggttccaaatatcataattaagaacagcaaa
gaacgaaatttaaaagaatccctgagagtgaatgcattggtgtttcataatggctcggta
caatggcttcctcctgctatttataaaacatcgtgcacaatggatgtgactctcttccca
tttgattggcagaattgttcaatggtgttccgctccgctgatcacgaccaatcagaaatg
atatttggtttaagctatggaagttcaatatgggttgacaaacatgtttacattaaaaat
ggagagtgggtcctttatcaaaagcctgcatatgtggttaaaaagaaaagcgatgaacag
ttccaagaagtttggttcactgtcattctttgtaggaaaccacagttctatgttctcaat
atgctgttgccttgtgttatgatatcaatcctttcatgctttgtttttcatttgcctgtt
gttgcaggtgaaaagattggtttatcaatatctcttctactgggtgacacaatttttgtg
tttttgttcgcacaaagaatgccttctactgctcttactgtaccccatgttgccacgtac
ttgttgttttcaatgattctcctatttctttctattttctgttgtgttgtggtctacaac
tttcactttcgttccaatgttacccacgagatgccacgggtttggaagtggttgtttttt
gataaatttgcacctttacttggattgcagcagccacaccgtaaagaaaaagtgcaaagc
aacaaatttgcagaaacaagcagcagtcggaatgatttcatagccaaaacaatttcgcag
aattatatgatgcaaaagtcaccaagtgagcagatgtacctgacacaggctccactatac
ggatttagatcaagacaaaaaagacttgtagatataaatggtggattgtctgcaattcct
attgctataaaaccagtgtcagagtcgattaaaacagctttgcgagaaactgaaaatgtg
accgcccactttaaaaaaataaaagctcaacgaagggcaaggcatgattggatttatctt
gccttcattcttgacagactattgatgtggttgtacatgtttgcgtttgtggttggttcg
ctgagttttgttgtgcttgtggcaactgaaaattatcctgagaatattgtggcagctgaa
aatgatatgaaagatctgtga
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