Ciona intestinalis (yellow sea squirt): 100177685
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Entry
100177685 CDS
T01056
Name
(RefSeq) protein spinster homolog 1 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100177685
Transporters [BR:
cin02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
100177685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
OATP
MFS_4
Motif
Other DBs
NCBI-GeneID:
100177685
NCBI-ProteinID:
XP_002119843
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MGTKNPQPNTLYPAGYEDNNSNSDESDGMVASHEALLPHSDTQHNTGLKNQPPKGPAVFP
KMPENEEKIEVVSDGISPMRKYASVFVLFLINLLNYMDRFTIAGVLMQIQEYFNISNGSA
GLLQTVFIISYMAVAPLFGFLGDRYNRKLVMLAGMIVWSGCTLFASFVNNQSHFLLFLVL
RGLVGIGEASYSTIAPTIIADLFVKEKRTNMLSVFYFAIPVGSGLGYIIGSAAAQAFGSW
HWALRITPGLGLITMALMMVVIPNPKRGASEANNTIETTGKLERETSYKEDLIYILKNKS
FICVTIGFTFMAFVVGSLTIWGPIFVAYSQVVTGTLQPCTDDNCEYGDVSFVFGLITCVA
GFIGVWAGAEWSKRWKARGQKNADALVCAIGLVIAAPLLLAGFQLATINLPSAWTFIFLA
DLAQCLTWTLVGDMTLYVTMPSRRSTANAVQILTMHLFGDAGSPYLLGVLSDAITANLPA
TYYSKYLGLQRAMYVALFASVLGGCGFLMASLFIVRDKKKVDDALAGLLPVSCSPNSDSS
GSVELEQISSDDNSSDPLIKPTPVIDNTNEYMEPSGQYMSGQLESFYTTKDEETNEKKQN
NHLNSKDSSPKVEQQGYISVGEPKQNFQEPKNKKYAAQTEEWYATDKPQSGDKGLNVSES
SSVTSNVCLLDAKESLI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaaaaaccctcaacccaatacattgtatcctgctggatatgaagataataat
agcaacagtgatgaaagtgatgggatggtagcaagtcatgaagcacttctccctcatagc
gacacacaacacaacactggcttgaagaaccaaccacctaaagggccagctgtttttcca
aaaatgccggaaaacgaagagaaaattgaggtcgttagcgacggaatttccccaatgagg
aaatatgcgtcggtgttcgtactatttctaatcaatcttttgaactacatggatcgtttt
actattgcaggtgtccttatgcagatccaagaatactttaacatcagtaatggatccgct
ggtcttttgcaaaccgtatttatcatcagctacatggctgttgcacccctcttcggtttc
ctaggcgacagatacaatagaaaactcgtgatgttggctggtatgatcgtgtggtcggga
tgcacgctctttgcatcttttgtgaataatcagtcgcatttcttgttgttccttgtacta
cgtggattagtcggcatcggggaggcttcatattcaaccatagcaccaaccatcattgcc
gatctgttcgtcaaagaaaagcgaactaacatgctctccgtgttttattttgctatacca
gtgggcagtggtctcggttacatcattggctctgcagctgcacaagcatttggatcatgg
cactgggcactaaggatcactcctggccttggattgatcaccatggctctcatgatggtg
gtaatacctaatccaaagagaggagcatcagaagccaacaacactatagaaacaaccggt
aaattggaacgagaaacttcttataaagaagacctcatttacattttaaaaaacaaaagt
ttcatttgcgtgaccattggatttacattcatggcgtttgttgttggatctctcacaatc
tggggaccaatatttgttgcttattcacaagttgttactggcacactgcaaccatgcaca
gatgataattgtgaatatggagatgtgtcgtttgtttttggattgatcacatgtgtggcg
ggatttatcggagtgtgggcaggagcggagtggtcgaagagatggaaagcaagaggacag
aagaatgctgatgctcttgtgtgtgctattggtttggttattgcagctccattattattg
gctggatttcaacttgcaactatcaatcttccttctgcatggacttttattttcttggct
gatcttgctcaatgtttgacatggacactagttggtgatatgacgctgtatgtgacaatg
ccaagtagaagatcaacagcaaacgcagttcaaatacttacaatgcatttatttggagat
gctggttctccttatctacttggagtgctctcggatgcaataacagcaaatctcccagca
acttattacagcaaataccttggtttacaacgagcaatgtacgttgcattgtttgcatca
gtgcttggtggatgtggattcctgatggcttcgttattcattgtgcgtgacaagaaaaaa
gtggacgatgcattagcaggtttgttgccagtgagttgttcaccaaactcggacagcagt
ggttctgttgaactagagcagatctcaagtgatgataatagttcagacccattaatcaaa
cccacaccagtaatagacaatactaatgaatacatggaaccatctggacagtatatgtct
ggtcaattagaatcattctacaccactaaagatgaagaaacaaatgaaaagaaacaaaat
aatcatctaaattctaaagacagttcacccaaagtggaacaacaaggttacatttcagtc
ggtgaacctaaacaaaattttcaggaacctaagaataaaaaatatgctgctcaaactgag
gagtggtatgcaactgacaagccacaaagtggtgataaaggtttaaatgtatcggagtca
agttcagttacatccaatgtatgtttgcttgacgctaaagaaagcttaatttaa
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