Ciona intestinalis (yellow sea squirt): 100177705
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Entry
100177705 CDS
T01056
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100177705
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100177705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100177705
NCBI-ProteinID:
XP_002122580
Ensembl:
ENSCING00000003845
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MSLKGEFPIEKPVKKREKWKSKIDFVFGVAGGSIGLGNVWRFPYLCYKNGGGAFLIPYVL
FLVGAAVPIFFLEAAIGQFTSRSVSSAWDMFPLMRGIGFASMTIIMNLNTYYMAVLAWSL
RYVVASFESPLPWTTCHNAWNSDRCFVYGSNTSASENFEENMTSSQWNMTSLPPVVETSS
NETGFFNTSSAFNTSSNDVRVSSVIEYWERGVLGKSSGVDEIGSVQMPLFGCLLVAWLII
YFCIWRGIAWTSKVVYFTATFPLFMLLVLFIRGVTLDGASDGVSYYLTPNITKLQEPLVW
VDAATQVFYSYSLCNGIMVAMGSYNNYHQNLYRDTIVLSLLNSGTSFFAGFTVFSVLGFM
AKEQNTTIDLVAESGPGLVFIAYPKAITLMPLPNLWGALFFLMIFLLGLDSQFIGQESFI
AAISDLKPNLFNKPWRREKLVAGVCGVQFLIGIIMITQGGVYVFNMYDNYAAAGWCLFFI
GVCECVTVSWLYGITDFWGHVCHMLGFKPRVPWFKYAWAVVAPVLTSSVFIYSLVQYEPL
TYNRTYIYPMWAQAVCWCLALSAILWIPFYAIYRFAVAKGTMYERWIEVTTVPQKLEQRL
ETKKKIFGIVKEKNGIILEPLCLNHKV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaaagggggaattcccgattgagaaaccggtaaagaagcgagaaaaatggaaa
agtaaaattgacttcgtgtttggggtcgctggtggatcgattgggctcggaaatgtctgg
aggtttccctacttatgctacaaaaacggtggaggtgccttcctgatcccttacgtttta
tttctggtcggagcggccgtccccatcttcttcctggaagcagcaattggtcaattcacg
agcaggagcgtttcttcggcgtgggacatgttccccttgatgagaggcatcgggttcgct
tcaatgacaatcataatgaacttgaatacttactacatggctgtgctggcgtggtcgttg
aggtacgtggtagcaagctttgaatctccgttgccctggaccacgtgtcacaacgcttgg
aacagcgaccgttgtttcgtatacgggagcaacaccagtgcgagtgaaaatttcgaagaa
aacatgacgtcatcgcaatggaatatgacgtcattgccgcccgtggttgaaacgtcatca
aatgaaactggattcttcaacacatcatcagcgtttaatacgtcatcaaatgacgtcaga
gtgtcgtcagtgatcgagtactgggagcgcggggttcttggtaaatcaagcggcgtggat
gagataggttcggtacaaatgccgttgtttggatgcttactggtggcgtggctcatcata
tatttctgtatatggaggggtatagcatggaccagcaaggttgtttacttcacggccacc
tttcccttattcatgctcctcgtgttgttcatcaggggtgtaacattagacggggcaagc
gacggggtgtcatattacttaacgcccaatatcactaaactacaagaaccgctggtatgg
gttgatgccgccacccaagttttttactcctattcactatgcaatggtattatggtggca
atggggagttataacaattatcatcaaaacttatacagagacaccattgttttgtcatta
ttgaacagcggaacgagcttttttgcagggttcaccgttttctcagttctaggatttatg
gcaaaggaacagaacacaacgatagacttggtggcagagtctggcccaggacttgtattt
atagcttaccccaaagcaatcactcttatgcccctccctaacctatggggtgccttgttc
tttcttatgatctttttattaggccttgacagtcagtttatcggccaagaaagttttata
gctgccatttctgatctcaaaccaaacttattcaacaaaccatggcgaagggaaaagttg
gtcgctggagtttgtggcgtgcagtttctaatcggtattatcatgatcacacagggtggc
gtttacgtgtttaacatgtacgacaactatgctgcagcgggctggtgtcttttcttcatc
ggcgtgtgcgagtgcgtcactgtcagctggctctacggcataactgacttctggggccac
gtgtgccacatgttgggttttaaaccacgagtgccgtggttcaaatacgcatgggcagtt
gtggcccccgttctaacttcaagtgtcttcatatacagtttggttcaatatgaaccacta
acatacaaccgtacctacatatacccgatgtgggcgcaagcagtttgttggtgccttgca
cttagtgccatcttgtggatccctttctatgcaatttatcgcttcgctgttgctaaagga
accatgtatgagcgatggattgaggtgacaactgtcccacaaaaattagaacaaagattg
gaaacaaagaaaaaaatttttggaatcgtcaaagaaaagaatggaattattctagaacct
ttgtgtttgaaccataaagtatga
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