Ciona intestinalis (yellow sea squirt): 100177727
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Entry
100177727 CDS
T01056
Name
(RefSeq) rRNA-processing protein FCF1 homolog
KO
K14566
U3 small nucleolar RNA-associated protein 24
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100177727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100177727
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100177727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fcf1
PIN_9
Motif
Other DBs
NCBI-GeneID:
100177727
NCBI-ProteinID:
XP_002126396
Ensembl:
ENSCING00000018434
LinkDB
All DBs
Position
11:complement(1469152..1470433)
Genome browser
AA seq
203 aa
AA seq
DB search
MGRDKRTRKFAEMKRMINLKDKRITRDNKKEKKKKVNIKKKETGELVKRFLPQQSSALFF
KYNEQLGPPYHILVDTNFINFSIKNKLEMMQSMMDCLYAKCIPCITDCVMAELEKLGPKF
RVALRIAKDPRFDRLPCMHKGTYADDCLVQRVTQHKCYIVATCDRDLKRRIRKIPGVPIM
YLSQHKYTIERMPDAFGAPKSDQ
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagataaaagaacaaggaagtttgctgagatgaaacgaatgatcaatttaaag
gataaacgaatcacaagagataataaaaaagaaaagaagaaaaaggtgaatattaaaaag
aaagaaactggagaactggtaaagaggttcttaccccagcaatcttctgcattgttcttc
aaatacaacgaacaactcgggccaccttatcatatccttgttgacacgaatttcattaat
ttctcgatcaaaaacaaactggaaatgatgcaatcaatgatggattgcttgtatgctaaa
tgcataccgtgtataacagactgtgttatggctgaactggaaaaactgggtcctaagttt
cgagttgccttaagaattgcgaaagatccacgatttgatcgactaccgtgcatgcataaa
ggaacgtatgcggatgactgtttggtgcagcgggtgactcagcataaatgttacatcgta
gcgacttgcgatcgtgatttgaaacgtagaattcgaaagatacccggtgttccaatcatg
tatttatcacaacataaatacacaatagagagaatgccggatgcttttggtgcacctaaa
tctgaccagtaa
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