Ciona intestinalis (yellow sea squirt): 100177730
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Entry
100177730 CDS
T01056
Name
(RefSeq) sorting nexin-17
KO
K17929
sorting nexin-17
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100177730
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100177730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNX17_FERM_C
SNX17-27-31_F1_FERM
PX
SNX17-31_F2_FERM
RA_2
RA
Ras_bdg_2
Fn3-I_PB4
Motif
Other DBs
NCBI-GeneID:
100177730
NCBI-ProteinID:
XP_018672394
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MHFSIPDTEEIEDSTGSSYKVFNVHVNGVLHCSVRYSQLHDLNNQFRKELKLKTLPQFPP
KKLLQLNDSNLKERRVQLEKYIQEVSQDPMLSNSDIFNAFLRRAQQETRREESIPVSLNI
YLLNGSKVQLNISSTDQTDDVLENTIVTIGLPEDLTYYFGLYLVRSDNQPTVIRQLQDFE
CPYISLKSLNDRRLYKIVIRKSYWDQCYDEIYKTDRTALNLLHSQAENDVKVGWTGCSDA
AKVQLTTFNKRGSKKEFLELCQTLQNYGYIQFKPCVSDFPEKNSRVIISAGNYEVKFKIL
MRGKQKQVKEAAFNVTRIKCWRILSMYDDSTNESDDPVLQFEYLVGKDNLQWITLQSEQA
IMLSMCIKSMVDELLRKRKGDKIRKPSDRIQDKTKPTFKPRDKTTECLFDASEIQVLERE
GASNVEKAKESVKKITEKLASVSILSKPVTTDGVNHSNDVTQSVASFEPIGDDDL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttcaattccggatactgaagaaatcgaagattcaactggttcatcatacaag
gtgtttaacgtgcatgtgaatggagtgcttcattgtagtgtaagatacagtcagttgcat
gatttaaacaatcagtttcggaaagaattgaagctaaaaacgctgcctcaatttccacca
aagaaacttctgcagctgaatgattccaatcttaaggaacgcagagttcagctagaaaaa
tatattcaagaagtgagtcaagatccaatgttatcaaatagtgatatattcaatgcattt
ctaagaagagcacaacaggaaactagaagagaagaatcgattcctgtttctctgaatatt
tatcttttaaatggatctaaagttcagctaaacatcagcagcacagatcaaactgatgat
gttcttgagaatacgattgtaactattggtcttccagaagatttgacttattactttggg
ttatatcttgttcgttcagataatcagcctacagttatacgacaactacaggactttgaa
tgtccgtacatctctttaaaaagtttgaatgatcgacgtttatacaaaattgtcatcaga
aaatcttactgggatcagtgctatgatgagatttacaaaacagaccgaactgccttaaac
cttctgcattcacaggctgaaaatgatgttaaagtaggatggacaggttgttctgatgca
gcaaaagtacaactgactacttttaacaagagagggtcaaagaaagagtttttagaatta
tgccaaactcttcaaaactatggatacattcaatttaaaccatgtgtcagcgattttcca
gagaaaaacagccgagtcattatcagtgcagggaactatgaagtcaaattcaagatatta
atgcgtggcaagcaaaagcaagtaaaggaagctgcattcaatgtgaccagaattaaatgt
tggaggatattatcaatgtacgatgactcaacgaatgaatcggatgatccagtgttacaa
tttgaatacttggttggtaaggataatcttcaatggataacattacagagtgaacaggca
ataatgctgagcatgtgtattaaatcaatggtggatgaattgcttcgtaagagaaaaggt
gacaagattaggaagccttctgacagaatccaagacaaaaccaaaccaactttcaaacca
cgagataaaacaacggaatgtttgtttgatgcttcagagatccaggtgctggagagagaa
ggtgcaagtaatgtagaaaaggctaaagaatccgtaaaaaagataacagaaaagttggca
agcgtttctattctttcaaaacctgttacaaccgatggtgtaaatcattccaatgacgtc
actcagtcagttgcttcgtttgaaccaatcggagacgatgatttataa
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