Ciona intestinalis (yellow sea squirt): 100177732
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Entry
100177732 CDS
T01056
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 12-like
KO
K03035
26S proteasome regulatory subunit N5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100177732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cin03051
]
100177732
Proteasome [BR:
cin03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
100177732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN5_C
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
100177732
NCBI-ProteinID:
XP_002124473
Ensembl:
ENSCING00000005232
LinkDB
All DBs
Position
1:3194598..3196377
Genome browser
AA seq
454 aa
AA seq
DB search
MSGDGKLEKMEVDYSETVDKLIPECETIAKDGNLEEALEKLYGLEKQTRVACDMVSNGKI
MVCAVKICFEAKKWEMLNDIIVVLTKKRSQLKLAVAKMVQECYTYVEKTPDLETKLKLID
TLRVVTEGKIYVENERARLTMKLAKIKENQGDIGEAATILQELQVETFGSMERKEKIEFI
LEQMRLCLAKKDYIRVQIISKKISIRFFENKDEDVQQLKLRYYQMMIELDLADGNYLSTC
KHFKAVYDTPLIETDKIKWKQALKSVVLYVILAPHDNEQSDMLERVRTEKKLEEIPKYKE
LLECFVSQELMQLEKFMALYEHELREGESGSPCTDVFLHTEDGQKRWKDFANRVVEHNIR
IMAKYYTRITSKRMSNLLDLSVEEAEEYLAKLVVNKTVYAKIDRLAGVVTFTRPRDPSDV
LNEWSHSVNKLMGLVNKATHLIAKEEMIHSLKAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagatggaaaactcgaaaagatggaagttgactacagcgagactgtagataag
ctcattccagagtgcgaaacaatagcaaaggatgggaacttggaggaagctctcgaaaag
ttgtacggattggaaaaacaaacaagagttgcatgcgatatggtgtctaatggaaagatt
atggtatgtgctgtgaaaatttgtttcgaagcaaaaaaatgggaaatgcttaacgatatc
attgttgtgttaacaaagaaacgtagtcagcttaaactggccgtggcaaaaatggtacag
gagtgttatacttacgtggaaaaaacaccggatttggaaactaagcttaaactaattgac
acattaagagttgtgactgaaggaaagatatatgtggaaaatgaaagagccagattaacc
atgaaacttgcgaaaattaaagagaaccagggggatataggggaggccgctactattctg
caagagctccaagttgaaacattcggaagcatggaaaggaaggaaaaaatcgaatttatt
cttgagcaaatgaggctgtgtctggcaaaaaaggattacattcgcgttcagattatcagc
aaaaaaatcagcattcggttttttgaaaataaagacgaagatgtgcagcagttgaagttg
agatattatcaaatgatgattgaattggatttggctgacggaaattatttgtcaacctgc
aagcattttaaggcggtgtatgatacacctttgattgaaactgacaaaattaagtggaag
caagctctgaagagtgtggtgttgtatgtgatcttggcaccgcatgataatgagcagtct
gatatgctcgagagagtcagaacggaaaagaaattggaagaaattccgaaatacaaagag
ctgttggagtgcttcgtatctcaagaactgatgcagctggaaaagttcatggcattgtat
gagcatgagcttagggaaggagagagtggcagtccatgtacagatgtgttcttgcacact
gaggatggtcagaagaggtggaaggactttgctaatcgagttgttgagcacaacattcgt
atcatggccaagtattatacaaggatcacttctaaaaggatgtctaacttgctggatctg
tcggtggaagaagcagaggaatacctggcaaagttggtggttaataagactgtgtatgct
aagatagaccgactggctggtgtggtgactttcacaagaccgagagatccaagtgatgtt
ttaaatgagtggtctcattctgtcaacaagctcatgggtctagtgaacaaagctactcat
ttaattgcgaaagaagaaatgatccactctttaaaagcaatttga
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