Ciona intestinalis (yellow sea squirt): 100177761
Help
Entry
100177761 CDS
T01056
Name
(RefSeq) tudor domain-containing protein 5-like
KO
K18407
tudor domain-containing protein 5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100177761
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100177761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OST-HTH
TUDOR
S-antigen
Motif
Other DBs
NCBI-GeneID:
100177761
NCBI-ProteinID:
XP_002120687
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MSELLAEKNKVKKVLRSLLLSASCGLTPTQLERDYKQMAGEVLPYKKFHFMTSRDFLKSL
RDTLVFVYDGPHVIIHGIADDKTEHIKKMITKQRKPKTYNSLEGQLEPKRSPRIKKAPTL
YVPAFIRNNLFKVIKTFPNGFSISILPEIYSKVNGAKLHINGHGFENHRDLLLAMPDIVR
LEFGRTNRAGQNLYVYPAKYLTQTKVHGDKNNIAENKDCLEKEVTTEKKKEDKAIEEKSL
NKETEKIVKNHLAAKKVNTGPKQEVNNIFKQEYSPACQILQRELLQLLSGRPNGTWSLNI
SSLYEQKYNKPLELKNYGYFSIIEFMSTLGNKVSMYRPLPSGDWFFNIRSPNQTNPPKPP
ATDLTDVKIKLKQLMSRFNDGIVIECLNDLYQMTFNSSLPVGGVYINVETLLCKALDVVK
LCEKDGRCMVLPHDHSMGASPKQGSPIDAVGGGVCYRTLDVPAPSDDYIDIFVSHVVTPG
AFMVQLIGEDTTVALDELMDDLEEFYCSNEAAAYRMPSDLISVGQVCVTVSIQDKNWNRA
LITKEPLDCGFVEILFVDYGDIASVNVRSLFLLKEKFLNLPAQMIRSRLSHVQPYNLGSW
SLDSRRVMLDLCRNKPLVAKVTGVDTHNVMSLLICDTTHDTIDVYINDVLADQQFATLVC
DFASSHELERTRLAVENRQIQSMLPLGVAHQPPLEGSVILDAPPPYQPYATPTNQPITED
QGSFMTNHNINYDSSIMTETAESSIVATEMDHVTETSNQSSPPNEPHDVTLTPVHGIFGG
EENISTLPKHLLRKAHEELIKKRDEMLAMLVAQPSVNMRIEVENVFREIYKLETQLSEYD
AGVATTMGD
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattattggcagagaaaaataaagtaaagaaagtccttcgaagtttactgctt
tcagcatcatgcggtttgaccccgacgcagttggaacgagattataaacaaatggctggc
gaggttttgccgtataagaagtttcatttcatgacaagtcgcgacttcttgaaatctttg
cgtgatacgttggtgtttgtgtatgacgggcctcatgtcatcatacatggaatcgcggat
gataaaaccgaacatatcaagaaaatgattacaaaacaaagaaaaccgaaaacatacaac
tcacttgaggggcagctggaacccaaacgctccccccgaatcaagaaagctccaacacta
tatgttcccgctttcattcgaaacaatctcttcaaagttattaaaacttttccgaacgga
ttttcgatttcaattttgccagaaatttactctaaagtaaacggagcgaaacttcacatc
aacgggcacgggttcgaaaaccaccgtgacctgttgcttgcgatgccggatatcgttcgt
cttgaatttggtcgcacgaacagggcgggccagaatctctatgtttaccccgctaaatat
cttacacaaaccaaggtacacggcgataaaaataatatcgctgaaaataaagattgttta
gagaaggaagtaacaactgagaaaaaaaaggaagacaaagctattgaggaaaaaagtttg
aacaaagaaacggaaaaaatagttaaaaaccatttggctgcaaagaaagtgaacacgggt
cccaagcaagaagtgaacaacattttcaaacaagagtattcaccagcgtgtcagatactt
caacgggaattacttcaactgttgtcggggcgaccaaacgggacgtggtctctaaatatt
tcatcgctttatgaacagaaatataacaaaccccttgaacttaagaattacggatacttc
agtattattgagttcatgtcaacacttggtaacaaggtatcaatgtatcgcccgctgcct
tcaggggattggttctttaatataagaagcccaaatcaaacgaacccccccaaacctccg
gccaccgacctaacagatgtcaagataaagttgaaacaactgatgtcacgcttcaacgac
ggcattgttattgaatgtttgaacgatctttaccaaatgacctttaactcctcgttgccg
gtcgggggggtttacatcaatgtggagacattactgtgtaaagcattggatgttgtgaaa
ctttgtgagaaagatggtcgatgcatggtgcttccccacgatcatagcatgggtgcttcc
cctaaacaaggatccccaatagacgcggttggaggaggagtgtgttaccgaacactagat
gttcccgcaccatcggacgattacattgacatatttgtgtcgcacgtcgtaactccgggt
gcgttcatggttcagttgatcggggaggacacgacggtggctttggatgaattgatggat
gatttggaagaattctattgcagtaatgaagctgctgcgtatagaatgccgagcgattta
atcagcgtcggacaagtttgtgtcacggtgtcgattcaagacaagaattggaatagagcg
ttaattacaaaagaaccattggattgtgggtttgttgagatattgttcgttgattacggt
gacatcgcttctgtcaatgttcgttcgttgtttttgttgaaagagaagtttcttaacctt
cccgcgcaaatgattcgatcaaggttgtcccatgtgcaaccttataacctgggcagttgg
tcgttggattcgagacgcgtaatgttggatctgtgtcgtaacaaaccacttgttgctaaa
gtcacaggtgtggacactcataacgtaatgtcactgcttatatgcgacacaactcacgat
acaatcgatgtttacatcaatgatgtgttggccgatcaacaatttgcgacgttggtttgc
gactttgcgtcgagccacgaacttgaacgcacgagacttgctgtggagaatcggcagata
caatcgatgttaccacttggtgttgcacatcagccaccattggagggcagtgttatcctc
gatgccccgcccccataccaaccatatgcgacgcccacaaaccaaccaattacggaagac
caggggtcatttatgactaatcacaatatcaactatgactcatcaattatgacggaaact
gctgagtcatcaatcgttgccacggagatggatcatgtgacagaaacatcgaatcaaagt
tcgcccccaaatgagccacacgatgtcactctaacccctgttcatggaatatttggtggg
gaggaaaacatttcaactctacccaaacatttgttacgtaaagctcatgaagaactgata
aagaaaagagatgagatgcttgcgatgttggtcgctcagccatccgttaacatgaggatt
gaggtggaaaatgtgtttcgagaaatttataaacttgaaactcaactatcagaatacgat
gcaggtgttgcaacaacaatgggtgattag
DBGET
integrated database retrieval system
