Ciona intestinalis (yellow sea squirt): 100177772
Help
Entry
100177772 CDS
T01056
Name
(RefSeq) C-type lectin mannose-binding isoform-like
KO
K03991
mannose-binding lectin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100177772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177772
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cin04091
]
100177772
Membrane trafficking [BR:
cin04131
]
Endocytosis
Phagocytosis
Opsonins
100177772
Lectins [BR:
cin04091
]
C-Type lectins
Group 3: Collectins
100177772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
CC2-LZ
Motif
Other DBs
NCBI-GeneID:
100177772
NCBI-ProteinID:
XP_002129025
Ensembl:
ENSCING00000007171
UniProt:
F6ZAZ4
LinkDB
All DBs
Position
5:1887029..1888863
Genome browser
AA seq
237 aa
AA seq
DB search
MFSFKVCVLFIIGLHVAVHAGDQTYLTCSESGRPPLRGVRGPPGPAGPTGARGPKGATGV
PTKLKNQVQDLSKRLEKAENDLVLMTKTINEINSNVCQCMKVIDGQVWYGPGNGYLYLII
EKNMAHDEAHAKCSKYGATLAVHGPKNRDFMKILHKQLPVTTQEDYWIGLTDKQGEGRFV
WADGSPLKSSEANWHPGEPNDYENNEDCVGGNAAGSLKWNDVPCSHGELYALCERRE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgttcaaagtgtgcgttttgttcatcatcggtctacatgtagcagtgcatgcc
ggagaccaaacttacttaacttgttcagagagtggtaggccgccattaaggggcgtccga
ggaccacctggacccgcggggccaaccggtgctcgaggaccgaaaggggcgacaggggtt
ccgactaagctgaagaaccaagtacaggatttgtcgaaaaggttggaaaaggccgagaat
gatttggtgttgatgacaaaaaccatcaacgaaattaacagtaacgtgtgccaatgcatg
aaagttattgatgggcaagtttggtacggaccgggaaacggttacctatacctcattatt
gaaaagaatatggcccacgacgaagctcacgcaaaatgtagtaaatacggagccaccctt
gcagtacacggaccaaagaacagagattttatgaaaatccttcacaaacaattgccggtt
acgacacaggaagactattggatcggtctcactgataaacagggtgagggccggtttgtt
tgggcggacggctccccactaaaaagtagtgaggcaaactggcatcctggggaaccaaac
gactacgaaaacaatgaagattgtgttggtggcaatgccgcaggtagtcttaagtggaat
gacgttccttgctcacatggcgagttatacgcactttgcgaacgtcgagaataa
DBGET
integrated database retrieval system
