Ciona intestinalis (yellow sea squirt): 100177775
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Entry
100177775 CDS
T01056
Name
(RefSeq) Bardet-Biedl syndrome 7 protein homolog
KO
K16749
Bardet-Biedl syndrome 7 protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100177775
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
BBSome
100177775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS2_Mid
FG-GAP_3
Itfg2
ANAPC16
Motif
Other DBs
NCBI-GeneID:
100177775
NCBI-ProteinID:
XP_002127808
Ensembl:
ENSCING00000004092
LinkDB
All DBs
Position
14:complement(3688143..3695474)
Genome browser
AA seq
739 aa
AA seq
DB search
MEFDLDVVDYLQAAVTDRKCMSILPNNDKRRVTQKVVVGDKSGVLQCFGVKKRDVNNIFK
LLPGAPISRVQLGGALGTPQDKIFVASGADIRGYSRKGKKFLDFNSNLTETVANLWISGS
DLVVGGQYVFNHFSDCVDQGYYLASDKINDIMCLPKPDEGNLTSVLACNDRVLRVLEGCE
LKYEAEVSGSPQTAVAYKGNGGEEGRDLVYGTSDGKLGHVLLTGEQPIYNWEINNESNLG
GINCLSHYDITGDGVMELLVGRDDGKVEIYSYDAVDQPTIRFSHSFNESVTSVQGGVVGS
LGYDEVVVSTYSGWVTGLTTEHLQKKVSGNFQEGAASVTNNPDSNFDAETTKKLLALRAE
IDSLQQQVENERNKHMQRTSKAVASNSDIMTYAPAFHVNDKFVLSPNDSSYTLSIEVQTA
IDHIVLQSDVPIDLLDVESTSAVVSYTTNPPSTDGSSNTDNFLLATYRCQANTTRLEVKV
RSIEGQFGHLQAYIVPRLQPKTSIMRKYPIKPLSLHQRVHDVDENRAMNELKLLGPFSFA
EVHSWLVFCLPDLPDRTPAGDNATLYFTNTFLETQLVCSYSKGEARICSDNISTISILKD
IMSKEATSKKISLNIQFDINEDSIRDTIRLLHPKLDQQLMLAKKVQLLDALQELQTHEGN
INFLAPEYQQILEEAEDLKIQFKKQPARLERLYGMITDLYIDKFKFKGINVKQKVPQLLA
TLDNYDQETLIEFFQQPVY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgatctggacgttgtggattatttacaggccgcggttaccgatagaaaatgt
atgagcattttgccaaacaatgataaacgacgagtgacacagaaagttgttgttggagat
aaaagtggagttttacaatgctttggtgtcaagaaaagagacgtgaacaacatctttaaa
cttcttcctggagccccaataagccgtgttcagctaggtggtgctcttgggacaccccag
gataaaatatttgtcgcatctggagctgatattcgaggttattcaagaaagggaaaaaag
tttttggactttaactcaaacttaacagaaactgtcgctaacctgtggattagtggaagt
gacttagttgtcggtggacaatatgttttcaaccatttctccgattgtgttgaccaaggt
tattacttggcaagcgataaaataaacgacatcatgtgtttgcctaaacctgatgaagga
aatcttacatcagtgttggcttgtaatgaccgtgtattaagggtgttagagggttgtgaa
ttaaaatatgaagcagaagtttccggctctccgcaaacagctgttgcctacaaaggaaat
ggtggagaagaaggaagagaccttgtgtatggaaccagtgatgggaagcttggacatgtt
ttattaacaggagagcaaccaatatacaactgggaaatcaacaacgaatcaaacttgggt
ggaattaattgtctgtctcattatgacatcacaggggatggtgtgatggaattattggtt
ggtcgtgatgacggaaaagttgaaatatacagctacgatgcagtggaccaacccactata
agattctcacattcgttcaatgagagcgtaacttccgtgcaaggtggtgtcgttgggtca
cttggttatgatgaggttgtagtatccacatactcagggtgggtaacagggcttacaacg
gagcatctgcagaagaaagtatccggaaactttcaagaaggtgcggcatcggtgaccaat
aatccagattcaaattttgacgcagaaacaacaaaaaaacttctcgctttgagagctgaa
atagattcattgcaacagcaggtggaaaatgagcgaaataaacacatgcagcgaacttca
aaagctgttgcttctaacagtgacattatgacatatgcacctgcatttcatgtcaatgat
aaatttgttctttcaccaaatgactccagctatactcttagtattgaagtacaaactgct
attgatcatattgtattacagagtgatgtcccaattgacctccttgatgttgaaagtacg
tctgctgttgtgtcatacaccaccaacccaccatccacagatggaagctcaaacaccgac
aacttcttacttgctacgtatagatgccaagccaatactacacgtctcgaggtaaaagtg
cgatccatcgaaggacagtttggtcatctacaagcttacattgttccaaggttgcagccg
aaaacatctattatgagaaaatacccgatcaaacctttgtcgcttcatcaacgtgtgcac
gatgtggatgaaaacagagccatgaatgagttgaagctgttgggtccgtttagttttgcc
gaagtccacagctggcttgtgttttgtttgcctgatttgccagacagaacaccagctgga
gataatgctacattgtatttcacaaacacttttcttgagacacagttggtttgcagttac
agcaaaggtgaagcaagaatttgctccgataatatttccacaatctccattttgaaagac
atcatgagtaaagaagcaacgtccaaaaagatttctctcaacattcagtttgatattaac
gaagattcaatcagggacaccatacgactcttgcatccaaaacttgatcaacaattaatg
ttggcaaagaaggttcagctgctcgatgcactgcaggagttgcaaacccatgaaggaaac
attaatttcttggcaccagagtatcagcagatattagaagaagctgaagatttgaaaatc
caatttaagaaacagccagcaagactggaacgtttgtatggcatgataactgatctttac
attgataagttcaaattcaaaggaatcaacgtgaaacagaaagttcctcagctgctggca
acactggataattatgatcaggaaacactgattgaattcttccagcaaccagtgtattga
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