Ciona intestinalis (yellow sea squirt): 100177800
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Entry
100177800 CDS
T01056
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100177800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100177800
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Pre-60S particles
GTPases
100177800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
AAA_16
AIG1
Motif
Other DBs
NCBI-GeneID:
100177800
NCBI-ProteinID:
XP_002124678
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All DBs
Position
7:2900591..2903933
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AA seq
549 aa
AA seq
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MIVFPLYLDMGRKNARAPGLGQSLIKNRFGKTQTGHRHAAELSAEHDAAQLNLQSVTELS
SLDDFLATAELAGTEFTAERLNIHFVNNDTKGIISNDQQERIEAAQLEYQHLLGIPRRPP
WTKQTTKEELEKLETESFLAWRKKLTVIQDNDDLIITPYEKNLDFWRQLWRVIERSDVIV
QIVDARDPLLFRCLDLETYVTESNESKQNILLVNKADLLSSKQRSEWRSHFEQLGVNVVF
WSAVLENEKLDENFDHSQLEALDVDDLFTREQLIDFLKSLIDKPNKVVGMVGYPNVGKSS
TVNTLMGVKKAAVSATPGRTKHFQTLHIDSELCLCDCPGLVFPSFVSNKAEMVLSGILPI
DQMRDHVAPVNLLGHRIPRRVIEVTYGFNISKPKEGENPDRVPTAAEILSAHALSRGFMT
THGQPDNSRSARVILKDYVNGKLLCSVPPPGVSGEEYKAWTISKVEKVVNCMPDVVNDDM
ATVVARIQRLNKKDVGPTISKVESDFFAPKEVRVFTKGAKQDLASGKGSKKHHNNKKKEK
TRRIRATEY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgattgtatttcctctgtacttggacatggggagaaaaaacgcgagagcgccagggctt
ggacagagcttaattaaaaacagatttggtaaaactcagactggacatcgacatgcagcc
gaattatccgcagaacacgacgcggcgcaactcaatcttcaatcagttaccgaactcagt
tctttggacgattttctcgccacagcagaacttgctgggaccgaattcacagctgaaaga
ctaaacattcattttgtaaataatgacacaaaaggaatcatatccaatgaccaacaagag
aggattgaagctgctcaacttgaataccaacatctacttggtattccacgacgaccccca
tggaccaaacaaactacaaaggaagaacttgagaaattggaaacggaatctttcttggct
tggagaaaaaaactgactgttattcaagataatgatgacctgatcatcactccttatgag
aagaacttagacttctggaggcaactgtggagagtcattgaaagaagtgatgtcatcgtg
caaattgtggatgcaagagacccacttttgtttcgatgcttggacctggagacttatgtg
acagaaagcaatgaatcgaaacagaacatattgcttgtcaacaaggctgatttactttca
tcaaagcaacgaagtgaatggagaagtcactttgaacaattaggagtgaatgtggttttc
tggtcagcagttttggaaaatgaaaaacttgacgagaattttgatcattcacagttagaa
gctcttgacgttgacgacctattcactcgtgaacagttgattgatttcttaaaaagttta
attgataaacccaacaaagttgtgggcatggtgggttaccctaatgttggaaaaagctca
actgttaacacactaatgggggtaaaaaaggcagctgtatctgcaacacctggaagaaca
aaacattttcaaactttacatattgacagtgagttatgtctgtgcgattgtcctggtctt
gttttcccaagttttgtctctaacaaagcagaaatggtactcagtggcattctacctatc
gaccagatgcgagaccacgttgcgcctgtaaatttactcggtcatcgaattcctcgtaga
gttatagaagtgacgtatggttttaacatctcaaaacctaaagaaggagaaaatcctgac
cgtgtcccaactgctgcggaaattctcagcgcgcatgctttatcacgtggtttcatgaca
acgcacggacaaccagacaattcccgttctgcgagggttattttaaaagattatgttaac
ggaaaattactgtgttctgttccaccccctggagtgagtggcgaagaatataaagcttgg
accatttccaaagttgaaaaagtagtgaattgtatgcccgatgtagtaaatgacgacatg
gcaactgtagttgccagaattcaacgtctgaacaagaaagatgttggaccaacaattagc
aaagttgaatcggacttttttgcaccaaaagaagtacgcgtgtttacaaaaggtgctaaa
caagacttggcaagtggaaaaggttcaaaaaagcaccacaacaacaagaaaaaagagaaa
acacgtcgcattagagcaactgaatattag
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