KEGG   Ciona intestinalis (yellow sea squirt): 100177804
Entry
100177804         CDS       T01056                                 
Name
(RefSeq) palladin-like
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100177804
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cin04990]
    100177804
Domain-containing proteins not elsewhere classified [BR:cin04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   100177804
SSDB
Motif
Pfam: I-set PDZ Ig_3 Ig_2 PDZ_6 Ig_4 Sp38
Other DBs
NCBI-GeneID: 100177804
NCBI-ProteinID: XP_002127748
Ensembl: ENSCING00000023912
UniProt: H2XKB3
LinkDB
Position
Unknown
AA seq 425 aa
MSMVVTMTGGSPWGFKMTGGKDFRLPLAIGKVKAGGKASKCGVVEGYWIEKVNGEDFTNL
GHHEAQNKIKSAGATLVMELCKPKSKPPPQPTVTSLPTNNQTKATPQVTYQPGEHRYNKY
SAESDWQKSHQSQSPAMQKAYHKSVKAPLLTEAPAFTITPEIKELILEDEKTTESGLKAS
EVKTWQSQNGSTTPTPSPVPPPVPSNGNHSRAAANIGKFIKGPGANSYGEPDFTKPLQDI
SAPLGEPAVLEVRIAPILPTPSVHWYHNNKPARESKEKDIRFLCNGPVHTLVLGELSNET
LGMYTCTIMNKHGTKSSRCNVTVKNDGQKIQNRKPTVYIPPNQTQAPKQDSKRVIPSTSL
GLYSSRNVQESYDGQVNRPQQRKNSEESEVMRALREEDDDVTKQTRQTRAIKYLEQTLLP
ESDDL
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtccatggtcgtgacgatgacagggggaagtccctggggatttaaaatgacgggtggg
aaagattttcgacttccgttggcgatcgggaaggtgaaagctggtggcaaggcatccaag
tgtggggtggtagaaggttattggattgagaaagtgaatggggaagatttcaccaacctt
ggacatcatgaagcacagaataaaatcaaaagtgcgggagctacacttgttatggagcta
tgcaaaccgaaatcaaaacccccgccccagccaactgttacatcactaccaactaacaat
caaacaaaagcgacaccccaagtaacttaccagcctggtgaacatagatacaacaaatat
tccgcggaatctgattggcagaaatctcaccaatcacaatcaccagcgatgcagaaagcg
tatcataaatctgtgaaagcccccctgctgactgaggcacctgcgttcacaattacccct
gagataaaggagcttattttggaagatgagaaaaccactgagtcaggtttaaaagctagt
gaagttaaaacttggcaaagtcagaatggaagtacgacccctaccccatccccggtccca
cccccagtgcccagtaatggcaaccatagtagagctgctgcaaacattggaaagtttata
aaaggacctggagccaatagttatggcgaacctgatttcactaagcccctacaagacatc
tctgcaccccttggtgaaccagcagtgttagaagtacgcattgcacccatactaccaacc
ccttctgtacattggtatcataataataaaccagcacgagaatcaaaggaaaaagatatc
aggtttttatgtaatgggccagtccatactttagtattgggggaactatcgaacgaaaca
cttgggatgtatacttgcaccattatgaacaaacatggaacaaaatcttcacgttgtaat
gtcactgttaagaatgatggacagaaaattcagaaccgcaagcctacagtctacatcccc
cccaaccaaacacaagcccctaaacaagacagcaagcgtgtaataccaagcacttccctt
ggtttatattcatcaaggaatgtacaagagtcgtatgatgggcaagtcaacaggccacaa
caaaggaaaaacagcgaggaatccgaagtaatgcgcgcactacgggaagaggacgatgac
gtcaccaaacagacacgtcagacccgagctataaaatatctagaacagacattgcttcca
gaatccgatgatctgtga

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