Ciona intestinalis (yellow sea squirt): 100177806
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Entry
100177806 CDS
T01056
Name
(RefSeq) lethal(2) giant larvae protein homolog 1 isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177806
Membrane trafficking [BR:
cin04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100177806
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Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_HPS5
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_VPS8
Lgl_C
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
100177806
NCBI-ProteinID:
XP_018666869
Ensembl:
ENSCING00000009025
ENSCING00000024144
LinkDB
All DBs
Position
3:4862548..4885478
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AA seq
1080 aa
AA seq
DB search
MFKKWKKGAHIDPQREKVKEDIFNFKKTVEHGFPHHPSAFDYDPILKLMAIGTKTGAVKI
FGAPGVEFTGVHPEVNQVLQLHFLHGQGRIVSILDDNTMRMWELTNIKDDPLGSQVLTEV
GASELAGRPSMNQITVVSIRSSNDVMWVGTEGGGIYSLTLPDFNPREGGTIHQDQVMQSI
PDHYKTGKALGPVEAIQEHPNNPSLILIGYSRGLVVLWNDSTQSVDKYYLNDKALESLSW
HSNCQEFISAHNDGYLCTWRLESSSQHTSYTPYGPFPCKAITKILWKSSRNDPYTVFSGG
MPRANYGDRHCVTVMNGSKHVTFDFTSRVIDFFVISKNQVNAEWEEPEFLIVLAEEELIA
IDLTQEGWPTLTPPYLASPHASAITCSCYVEEVDEKIWEKICDVANEGKTNKSTSAWPIV
GGKNLSAKRVLSHNLLMTGHEDGSVKLWDISSTSMFPLIKIQTSTVFVTDSDGANDGDAF
EEQFPPFRKVGEFDPYSDDPRLAIRKVAMCPNTGTLVAGGTAGQVVVFILSSESIESFIT
SSVIDLLEGRMDFTWKGHDKLDTKDDHILMKPGYQVNNIIQCQPPASLTSININANWGLV
GIGTGHGFALFDYLQNKTVLCRCTLEAGDQSAMEGNFSRIKSFKMSLRQSMRRIRGSIGG
GGSRRRRGSRRRYKRDNMSQKLQEANKALVDEEETASASGWSPATTGQRRVEARSSDDGM
TGMVRCTYFATTFVRDSISATPTFWAGTNSGAIYVFALHVPDYSHRQDHEVTSVVGKHIQ
LLHRAPVVDITVLDNLGIPVPTSDAKHDAKPNNGNAVGRSSPPASQHHSLVICSEEQVKV
FTLPKISAKRKFKLTAVDGSLMRKISYAKFVSSKNPDYHEYALVSLTNIGEMHILGQLPM
LRPQETYSCISRDDPNGIASCLLTGSGQGIYLISPSEYERFSLSTVGSIEPMCRVIRNNM
ANHSTEQEVNETKVEVVVEEITNTSLEKMKTPPRKREGAAVVATKPSSPKTPLLGDSDEY
DDEEEDDTRHVERHESVLEEAERTLAEVSEEMGDVDETDEINVQDLLGTVAEAEKVLNAA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaaatggaaaaagggagctcatatagacccacagagggaaaaagttaaagaa
gatatatttaatttcaaaaagacagttgaacatggatttccacatcatccttcagcattt
gattacgacccaattcttaaactcatggcaattggaactaaaacaggagccgtcaaaata
tttggagctccaggtgtggaatttacaggagttcatcctgaagtgaaccaagttttacag
cttcatttcctgcatggccagggtcgcatagtaagcatcctggatgacaacacaatgcga
atgtgggagttaaccaacatcaaagatgatcctctgggatcacaagttctaacagaagta
ggagcatcagaacttgctggaaggccaagcatgaaccaaatcactgtagtgtccattcgc
tcaagcaacgatgtgatgtgggtgggaactgagggaggtggaatttattcattaactcta
cctgattttaaccctagagagggagggaccatccaccaggaccaagttatgcaaagtatt
cctgaccactataaaacaggcaaagcacttggccctgtcgaagcaatacaagaacatcca
aacaacccatctcttattctgatcggatacagtcgtggtttagttgttctgtggaatgac
tcaacacagagcgtggataaatattatttgaatgataaggcacttgaatccctgtcatgg
cactccaactgccaggagtttatatctgcccacaatgatggttatttatgtacatggagg
ttagaatcttcatcgcaacatacatcctacacaccatacggtccttttccatgcaaagcc
ataacaaaaatcttatggaagtcatctagaaacgatccatacacagtattcagtgggggc
atgccacgtgcaaattatggtgacagacattgtgttactgtaatgaatggatccaaacat
gtcacttttgacttcacatctcgcgttattgacttcttcgtcatttctaagaatcaagtc
aatgctgagtgggaagagccagagttcctcattgtcctcgctgaagaagagttgatcgcg
attgatcttactcaagaaggatggccgaccctcacacctccctatctcgcctctcctcac
gcatcagccatcacttgctcctgctatgtggaggaggtggatgagaagatttgggagaag
atctgcgatgtagcgaatgaaggaaagacgaataaatcgacttcagcatggccaatagtg
ggcgggaaaaatctgtcagcgaagcgtgttctttctcacaacttattgatgactggccac
gaagatggaagtgtaaagctatgggatatatcaagcacttccatgtttcctctgattaaa
attcaaacctctactgtgtttgtgactgattcagatggagcaaatgatggagatgcattt
gaagagcagtttcctccatttagaaaggttggtgaatttgatccgtacagtgatgatcca
aggttagctattcgtaaagtagccatgtgccctaacactggtacattggtggctggtgga
accgctggccaggtggttgtcttcatcctttcctccgagagcattgaaagtttcatcaca
agcagcgtgattgatttgttggagggtaggatggattttacatggaagggccatgataag
ctggacacaaaggatgatcatatattaatgaagccgggttaccaagtaaacaacataata
caatgtcaaccacctgccagtttaacctccatcaatataaacgctaactggggtctggtt
ggcataggaacaggtcatggctttgctctctttgattatttgcagaacaaaacagttttg
tgccgatgcacgttggaggcaggagatcagtctgccatggaaggaaacttttctaggatc
aaatccttcaagatgtccctgagacaatccatgaggagaatccgagggagcatcggaggc
gggggatcgaggaggagacgaggatcacgcaggagatacaagagggataatatgtcacag
aaacttcaagaagcgaacaaagctcttgttgacgaggaagaaacagcatcagctagtggt
tggtcgccagcaacaacggggcaacgaagagtggaagcaagatcatcagatgacgggatg
acggggatggttagatgtacttactttgccacaacgttcgttcgtgacagtatcagtgcc
acgccaacattctgggcaggaacaaactctggcgctatatacgtgtttgcgttacatgta
cccgactacagtcatagacaagaccatgaagtgacttcagtcgttggcaaacacatacaa
ctcttgcaccgagcaccagtggttgatattacagtgctcgataacctgggtatcccagta
cccaccagtgatgccaaacatgatgccaaaccaaataatggtaatgctgtgggcagatct
tcaccgcctgcatcgcaacaccattccctagttatctgctccgaggagcaagtcaaggtc
ttcactcttccaaagatctcggcgaagaggaagttcaagctcacagccgtggatggatcc
ctgatgaggaaaatctcgtacgctaagtttgtttcatccaaaaatccagattatcatgaa
tatgcactcgtatcactcactaatataggtgaaatgcacatccttggccaactaccaatg
ttacgaccacaggaaacatactcgtgcatatcaagggatgatcctaatggaatagcttcg
tgtttgcttactggaagcggccagggtatttaccttatctcgccttccgagtacgagcga
ttttctctatccactgttggcagcatagagccaatgtgtcgtgtcattcgcaacaacatg
gccaaccactcgacggagcaagaggtcaatgaaacaaaggttgaagtcgtggtggaggaa
ataaccaacacgagtcttgagaagatgaagactcctcctcggaagcgggagggagctgcc
gtcgtggcaaccaaaccatcttccccaaagactccccttctcggagacagtgatgagtac
gatgatgaggaggaagatgacactcgtcatgttgaaagacacgaaagtgtcttggaagag
gcggagagaacgcttgcagaagtgagcgaggagatgggagacgttgatgaaacagacgag
atcaacgtacaggatcttctcgggacggtagcagaagcagaaaaagttttgaacgctgct
tga
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