Ciona intestinalis (yellow sea squirt): 100177908
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Entry
100177908 CDS
T01056
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100177908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177908
Membrane trafficking [BR:
cin04131
]
Exocytosis
Others
Others
100177908
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100177908
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
CCDC39
PMD1-like
TMF_TATA_bd
Rod_CreS
CLIP1
TPR_MLP1_2
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
100177908
NCBI-ProteinID:
XP_018670964
Ensembl:
ENSCING00000000409
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MCLHGPGGKDGNPTCHNSLRLPPTPRVIMMSSSDGNKLQVNGEDDRGSLRSSGGDFILQL
QQDLESLRREIDIKESKLQSNMNSIKTFWSPELKKERALRKEERNQIVTLKEQLKVTQEE
NQHLHLTTQALQDELRAQRDLNQLLHEDFVTSPSDGGDKESTRIMQDNYDRLLRENELLQ
STMEELESRIEAQRQTLGTRDESVRKLLEMLQCKGLPKSDDEGLNVEVDSMKAQIIGYQS
RLGHMESLLHDKNIEVQQYKNRCLDGNEETSTIHKVIDAKEAKISSLERMNREVELELES
TKHEADIIMTQHREDVKQLEAVKSHSDFMKNKVDQLKSDVQKKETEIVTLQTRLDTLNNQ
QSDNRQHIDVLKESLNAKDQRASVLQSEVDSLRNRLDEKQRILDEKQDYLLRLQEDKSCD
ASELSHLRDTLDVKDRKILVLHKKIESLSEVVRERDGMLEEKKRALVALEEDSCTSDSAL
TTMEEALADKDKIVEALQHEISLLRQQLRDESADLNQQLKNAEQQLDCSRRDVTERETSI
SELQEQATSLASSIVKKDSFIKQLEINIQKHTEDFNRLQNQHKKAQQQAMTETTKEEFNL
KIRNLEIEVQSKVDEASRCQGDLDRLLGILKETENEKHSKDEKISAMEKKHKEQTMKIKS
LQTEMIEEARRKGAAQDRDVAKYLSEMQTKDERVEELEEALRESVSITAEREVVLAGVEE
GRRVAENQLAELVAEFTKTKQVLEETGMRVASMEVMVESKDRMLEKLRGERRKQMEEALE
MKQEALLAAISEKDSNIALLELSQPRKKSNADEVCLLRREKDALVQQLKQQTQNRLKLMQ
EDSDIASDAKRSDAKRKTRNKEEDGIWA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctccatggacctgggggtaaagacggcaatccaacatgtcataattcactacgt
ttacctccaacaccacgggtgattatgatgtcatcaagtgacggaaacaaactccaagtt
aacggggaagatgatcgtggaagcttacgtagcagcgggggcgacttcatcctacaacta
caacaagatcttgaatcattaagacgtgagattgatatcaaggagagcaaactccaatcc
aacatgaacagcatcaaaacattctggagtccagagttgaagaaggagagagctctgaga
aaagaagaaaggaatcagattgttactttaaaggaacaacttaaagttacacaagaagag
aatcagcacctccatttaaccacccaagcgttacaagacgaactacgtgcacagcgcgac
ctcaaccaacttctccacgaggatttcgtgacctcgccgtcagatgggggcgataaggag
tctacaagaataatgcaagacaattatgaccgattattacgcgagaacgagttgttacaa
tccacgatggaggaactggagtcgaggattgaagcgcaacgacaaacattggggacgagg
gatgaatcggttcgcaagttgttggagatgttgcagtgtaagggtttaccgaaatctgat
gacgaagggttaaacgtggaggtggattcaatgaaggctcagatcatcgggtaccaaagt
agactcggtcacatggagagcttgctgcatgataagaatatagaagtgcagcagtacaag
aaccgttgtttggatggcaacgaggaaacttcgacgattcacaaagttatcgacgcgaag
gaagcaaagatatcgtccttagaacgaatgaaccgtgaagtggagctcgaacttgaatcg
acgaaacacgaagccgacatcatcatgactcagcacagggaagatgtgaagcaactggaa
gcggtgaagagtcattcggacttcatgaagaataaggttgaccaattaaaatctgatgtc
cagaagaaagagacggagatagtaacgttgcaaacgaggttggatacgttgaacaaccaa
caatcagataaccgtcaacacattgacgtgctgaaagaatcgttgaatgctaaggatcaa
cgagcgtctgtgttgcaatcggaggttgactcattgcgcaatcgcctggatgaaaaacaa
cgaatcctggacgagaaacaagattatctcttgcgcctccaagaggataaaagttgcgac
gcgtcggagttgtcacatttacgcgacaccctggacgttaaggatcgtaaaatcttggtc
ctccataaaaagattgagagtttatcggaagttgttcgagagcgcgacggaatgttggag
gagaagaaacgagcgttggttgcgttggaggaagactcttgtacgagcgattcagcgttg
acgacgatggaagaagcactcgctgataaggacaaaatcgttgaagcgttacaacacgaa
atatcgttgctacgacaacagttacgagatgaatcagcagatttgaatcaacaattgaaa
aacgctgagcaacaattggattgttcgcgtcgtgatgtcacagagagagagacctcgata
agcgaactacaagaacaagcgacctccctcgcttcctcgatcgtgaagaaagattcgttc
atcaaacaactcgagatcaacatccagaaacacacggaggatttcaacaggctgcagaat
caacataagaaggcccaacaacaagcgatgacggaaaccacgaaggaagaatttaatttg
aagattcgtaatttggagattgaggttcagtcgaaagtggacgaggcatcacgttgccaa
ggagatctcgacaggctgttgggaatcctcaaagaaaccgaaaacgaaaaacactcaaaa
gatgaaaaaatatcggccatggaaaagaaacataaggaacaaaccatgaagatcaaatct
ttacaaacagagatgattgaagaagcacgaaggaaaggagccgcacaagatcgggatgtc
gcaaagtatttgagcgaaatgcaaacgaaagacgagcgagtagaggagttggaagaagct
ttgcgtgagagcgttagtatcactgctgagagggaggtcgtgttggcgggggtggaggag
gggcggagggtggccgagaaccagcttgctgagctggttgctgagtttacgaagacgaaa
caagtcctcgaggaaacggggatgagagtcgcgagtatggaagtcatggtggaaagtaaa
gatcggatgttggagaagttgagaggggagaggaggaagcagatggaggaggctctcgag
atgaaacaggaagcgttattggcagcgatcagcgagaaggattcgaacatagcgttgttg
gagttatcgcaaccacgtaagaaatcgaacgcggatgaagtttgtttgttaaggagggag
aaggatgcgttggtacaacaacttaaacaacagacgcagaaccggttaaagttgatgcag
gaagattccgatattgccagtgatgccaaacgcagtgatgccaaacgtaaaacaaggaat
aaggaggaggatgggatttgggcgtga
DBGET
integrated database retrieval system
