Ciona intestinalis (yellow sea squirt): 100177936
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Entry
100177936 CDS
T01056
Name
(RefSeq) propionyl-CoA carboxylase alpha chain, mitochondrial
KO
K01965
propionyl-CoA carboxylase alpha chain [EC:
6.4.1.3
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00280
Valine, leucine and isoleucine degradation
cin00630
Glyoxylate and dicarboxylate metabolism
cin00640
Propanoate metabolism
cin01100
Metabolic pathways
cin01200
Carbon metabolism
Module
cin_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
100177936
00640 Propanoate metabolism
100177936
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100177936
Enzymes [BR:
cin01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
100177936
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
RimK
ATP-grasp
ATPgrasp_ST
HlyD_3
GARS_A
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
100177936
NCBI-ProteinID:
XP_002131318
Ensembl:
ENSCING00000008081
LinkDB
All DBs
Position
5:complement(3344026..3354117)
Genome browser
AA seq
708 aa
AA seq
DB search
MSRLMQVYRSFVTSQRVPNKPWVQWKTYSSASASVLKDDKTFDKILIANRGEIACRVMRT
CKDMGIKTVAIHSEADANSVHTLMADEAVCVGPAPSAQSYLNMPVILDAIKATGAQAVHP
GYGFLSENKEFAKTLAANNVAFIGPDTFAIDAMGDKIKSKLIAKEAGVNTIPGYDGVVEN
VEDAVKIAEEIGYPVMIKASAGGGGKGMRIAWNEKETREGFRFSSQEAAASFGDDRLLIE
KFIDTPRHIEMQVLADGYGNTLWLNERECSIQRRNQKVVEEAPSIYLDPTTREAMGKQAV
ALAEAVQYKSAGTVEFLVDSKKNFYFLEMNTRLQVEHPVTEYITGVDLVSEMIKVAAGHP
LSLTQDQIGINGWAMECRVYAEDPYKSFGLPSIGKLTRYVEPTHLDNVRVDSGITEGSDI
SIYYDPMISKLVSYGKDRSEAIDKMKTALDNYVIRGVKHNVPLCHEVLSNPMFIEGNIST
NFLMEVYPDGFNGKILNVNEHNELCAIACAFYAKQQHGNRQFINQTRMPKLADDVNKWKV
EVQLGEEKSSAVVEKTTDSYTVTMGNNTVNISSDWSLTNPTQHISVNGGNKFTVQCLQAS
PTGQFQVQYHGTLFNLQVLDNTVASLKKFMPVKIPEDLSSVIKAPMPGTVFSIACSVGDI
VTVGQEVCIVEAMKMQNSLTATRDGKIKAIHCNAGDSIAEDDLLIELE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggttaatgcaagtttatcgaagttttgttacatcacaaagggttcctaacaag
ccatgggttcaatggaaaacttacagttcagcctctgcctcagtgttaaaagatgataag
acatttgataaaatactgatcgcaaacagaggggaaattgcctgtcgggtgatgcgaaca
tgcaaagacatgggcataaaaactgttgcaatacatagcgaagcagacgccaactctgtc
catactttaatggcagatgaagcagtatgtgttggccctgcaccttcagcacaaagttac
ttaaatatgccggttattctcgatgccattaaagccactggagcacaagcagttcatcct
ggttatggatttttatcagaaaacaaggaattcgcaaagactttggcagcaaataacgtt
gcattcatcggccctgatactttcgccatcgatgccatgggtgataaaattaagtcaaaa
cttatcgctaaagaagcgggtgtaaacacaatacctgggtatgatggggtagtggaaaat
gtggaggatgccgtcaaaattgcagaggaaattgggtatcctgtgatgatcaaagcatca
gctggaggaggaggaaaagggatgaggatcgcttggaacgagaaagagactcgtgagggt
ttccgtttttcgtcacaagaggcagcagcgagcttcggagacgatcgattgttgattgaa
aagtttatcgacacgccaagacatattgaaatgcaggtgcttgctgatggttatggcaac
accttgtggctgaatgaacgagaatgttcaatacaaagaagaaaccagaaagttgttgaa
gaagctccttcaatttatttagacccaaccacaagggaagctatggggaaacaagctgta
gcattggctgaagctgtgcaatataaaagtgcaggcaccgttgagtttcttgttgattca
aagaaaaatttttactttcttgaaatgaacacgaggttgcaagttgaacatcctgttact
gaatatatcactggtgttgacttagttagtgagatgatcaaagtagctgcaggtcaccca
ctctcattgacacaagatcaaataggaataaatggatgggcaatggagtgcagagtctac
gcagaggacccttataaatcattcggacttccttctattgggaagttaacacgatacgtt
gaacccactcacttagataatgtcagagtggacagtggaattactgaaggcagcgatatc
agtatttactatgaccctatgatttcaaagcttgtcagttatggtaaagaccgtagtgaa
gcgatcgacaaaatgaagacggcgctcgataattacgtgatacgaggtgtcaaacataat
gttccactttgtcatgaagtcttaagcaaccctatgtttattgaaggcaacatcagcacc
aattttctaatggaggtttatccagatggctttaatggcaaaatacttaacgtaaacgaa
cacaatgaactgtgtgctatcgcctgtgcattctatgcaaaacaacagcatggaaacagg
caatttattaatcagacaagaatgccaaaacttgctgatgatgtaaataaatggaaagtt
gaagttcaacttggggaggaaaaatcttctgctgttgttgagaaaaccacagatagttat
acggtaaccatgggcaacaatacagtgaacatttcatcagactggagtttaacgaaccca
acgcaacatatttccgtcaatggtggaaacaagtttactgtgcagtgtttgcaagctagc
cctactggccagtttcaagtccaatatcacggaactctgtttaatcttcaagttctagac
aacactgtggcaagtctgaaaaagttcatgcctgttaaaatcccggaagatttgtcttca
gttattaaagctccaatgccaggcaccgttttttcaattgcttgttctgttggagatata
gtgacagtaggtcaggaagtttgcattgtagaagctatgaagatgcagaacagtttaact
gcaaccagggatggaaaaataaaagcaattcactgcaatgctggtgacagtatcgcagaa
gatgatcttttgattgaattagagtga
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