Ciona intestinalis (yellow sea squirt): 100177964
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Entry
100177964 CDS
T01056
Name
(RefSeq) unconventional myosin-IXa isoform X1
KO
K10360
myosin IX
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100177964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100177964
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100177964
Membrane trafficking [BR:
cin04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
100177964
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100177964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
RhoGAP
RA
IQ
C1_1
RA_2
IQ_SCN5A_C
nSTAND3
C1_2
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
100177964
NCBI-ProteinID:
XP_009861763
LinkDB
All DBs
Position
Unknown
AA seq
2223 aa
AA seq
DB search
MAADATYLIHVHPVDVSASSVVESVRCTKRTTAAEVVEEVIEKLGVENGSSYVLVEMHKD
RGEEMILAHSDFPVQRMLLWPTHFQHSYKFVLREIDETGSVMYHGANSWHEKAERVSTER
DMASKGFLPPTKPSDSDCPDLCALSSLTQEKLLEVLRKRFMKDKIYTYSADTLISINPYK
FLPVYNPKYMTIYQNRRKEDLEPHIYAIADTAFNTMVRTKQNQCVVITGKSGSGKTQATH
FLVHHSLALCQKSYVTGVENMLTGAGPVLEAFGNAQTEHNNNSSRFGKFLKIYFYGSGLL
SGADVQTYLLEKSRLIHQEPYERNFHIFYYLLYGTSPEELSELYLDQNASYNYLKQCSKQ
ENPDAPAELERLRQAMEVMGFYGGAQRSIFRLIAAIVLLGNITFRTKSGRDETLEIVDES
YLTSVSSLLELDENVVRKCLLTRKAKAGAGERFILALKLHEARATRDAMAKALYQSLFDW
AVSSVNMALAQKTRDIKLRSQSQWLGLLDIFGFEDFAKNSFEQFCINYASEHLQHYCIKH
TFQLEQEEYRAEGLTWKEVDYADNSGCLLLYEKKLTGLFHLTDENFPGANNHTLLSNFNR
VHSGSRYYETTVVKEDAFIIQHYAGKVKYQIKDFREKNHDQVREDLINLVRTTNSSFLQG
ILSKSPAAVVRWGVLRATVRATYAFRNAGKGKLAPLTPHTVTDRWLGKQVETEEKMNQAA
YVHRKMLARLSLQQTSVSSSSSGSESSREGSFYGRRKVNATSRGRKKTNSITQQYQASLG
SLMATLEKAHPFFVRCIQPNSKKAALKLDDKLVLHQLRCSGLLQTIQLHQSRYPERMSLE
KFSSQFKLLMPHQEITLSGISNFLISIGLKPGKHFQTGRTQLFLRDHASRILKESLHEVV
LKHVVLLQSRIRGCICRRSYLQQRSAAIKIQSYWRMLEAQREIVEWHLAASIIQDAWRCY
LAQKFEGLMVQFQACIRGYLVRRRVQDARRKRVEEEDDQSARIIQRSWKNYRSKKRSNAA
VIIQRIYRGHQARTLYKNMQEIKENEKGAQVDVKEILKTKTETSQDPTKPASVEKEKSTK
STPTFNDTNNNHEPCCQEPKPQPDEPPTGPRPQFRPRTKAGEVFLQAAYPKSKIEVVKPV
VYVPSSKRKSTDEVLDGWSKSYDLKKSNKSPEPGRFQYTAPASKSKPPPEEKNEKLGKNE
DFSKSVKPSKNKRFLKHGQISTNKDLAVGENLSSSLVNNTVSVEADAKKSNEVLKLDDIE
INTDKTDKNYMETTFPAKVEPQRKQSKELARLEKEWLAFQRVEQQRQLIDLNRSQDGVRR
RNKQDQRIRDEITSLRLEQMNKLSQQLKTFGVGAESMPMLETTPFSRNPSNTSDSSTPPQ
SPLKLESDAQHILPDKPMMPSKSLVPTKTVLQNATEAQSKPVVPDNKSDSTSKPTEVSEP
AQKENGLATQNPTNPVFARSLSMESVAKEMPRRQRSNSAIEAYVASKLQPPSTDPVARKS
ASLSAEAFAKKCMHDQGETTHVEHGQDLDQPELQNQVDGVKRGSAFIEAMRKTFWGSSRG
QNRSHPYLAEKKSTDSVISAHGGSSEKLHHPEDHAVNIKSLEEEQFSPKLLVSSADELLL
LDDFIKSKTSNFKGDNLVDQVFKISLNEFCANLTALYSLTTLSGDTNGLRYKDIVANFRQ
VLEKTANHYSLDQYAAMMGVNGFRGYMNEFMNDVRPKYTKETKSKRKKIKDDSVEKLGHS
FAGVQWGITQVCEFCGNTMWLMEAGLVCKICKFACHKKCFKQLTTRCPGSMEGGRQKSRP
KKLFGESLASLASKDGLVPTFIDKCISYMEMNGIYQEGIYRKSAAATQNKLLEESLNKDI
ECQKVNFDDYNIHSVASCFKKFLRSLPSPLVPYDKYFEFLQSARLKNDRERVNALYHVLE
GIPQQNHATLERIVFHLARVAQQEPTNRMSPSNLAIVFTPCFFAAPTHVSPIEAAEHVGD
MTKAVECVITEQVKKVRSTLESISELQSVESSTNERLKQIRQSMGKGKKRRIRPSIQSGP
RSPPHRRPLADPKLDVVEEDTDLMKQEMQYEKKIATLRSRKESLTNRLPALTPQLPDDNH
HFLNEDITFTYPAIVKNIHLRHLNKHRAMTPHSRRRPTKYSSSLYSKKAMAPVPEEVKPP
PRRVSAKGKFKRLASAVQLQDDKDSFTRSSLIRNPIHRPHKKRGNAADLLASKASQLSKV
TSV
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagacgcaacatatttgattcatgtgcatcccgtggacgtctcggcctcctcg
gttgtagaatctgtacgctgcacgaaacgcacaactgccgcggaggtcgtggaagaagtt
atcgaaaaactaggagtagagaatggctcctcttatgtgctcgttgagatgcataaagat
agaggggaggaaatgattcttgctcactctgactttccggtgcagaggatgctgttatgg
cccactcacttccagcactcctacaagtttgttctgcgggaaatcgatgaaactggaagc
gtgatgtaccatggagccaactcgtggcacgagaaagctgagagagtttccactgaaaga
gacatggcttctaaagggtttctaccccctacaaaaccctccgattccgactgtcctgat
ttatgtgcgctatcatctttgacacaagagaaacttctggaagttttacgaaagcgattt
atgaaggataaaatatacacttattcagcggacacccttatatccataaacccctacaaa
ttcctccctgtctataacccaaaatacatgacgatttaccaaaatcggcgcaaagaggat
cttgaaccacatatatatgctattgccgacactgcgtttaacacaatggtacgaaccaag
caaaaccaatgtgttgtcataacagggaaatccggatccggtaaaacgcaagccacacat
tttctggtccaccattcccttgctctttgccaaaaaagttacgtgactggtgtggaaaat
atgcttactggtgccggccctgttttggaggcgtttggaaatgcacagacagagcacaac
aacaacagtagtcgatttggaaagtttttgaaaatatatttctacggaagtggtttattg
tcgggagctgatgtccaaacttatctgcttgagaagtcacgtctgatacatcaggaaccc
tatgaaaggaattttcacatattttactatctactgtatggaacctcaccagaggaactg
agcgagttatatcttgatcaaaatgcaagttacaactacctaaaacagtgcagtaaacaa
gagaaccctgatgcacctgccgagcttgaaagattacgacaagccatggaagtaatgggt
ttctatggtggagctcagagaagcatattccgactcattgcagcaattgtgctgctcggg
aatattactttcagaacgaaatctggtcgtgatgagacgttggaaatcgttgatgaaagt
tatttaacgagcgtgagttctctgcttgaacttgatgagaatgtcgtgaggaaatgctta
cttacaaggaaagcaaaagcgggcgcaggcgagcgatttatacttgctcttaaactacat
gaggcaagagccacccgggatgcaatggctaaagcgttgtaccagagtctgtttgactgg
gctgtcagcagtgtgaatatggcactagcgcaaaagacaagggacattaaacttcgttcc
cagagccaatggttaggattacttgatatttttggatttgaagattttgcgaaaaacagt
ttcgagcagttttgcatcaattatgcgagtgaacatcttcaacattattgcatcaaacat
acttttcaactggaacaggaggaatatcgtgctgaaggtttaacatggaaagaagtagat
tatgccgataactctggttgcttgttgctctatgagaagaaactaaccgggcttttccat
cttactgatgaaaacttccctggtgccaacaaccacacgttgctctcaaatttcaaccga
gtccacagcggttcacgatattatgagacaactgtagtgaaggaagatgccttcattata
caacattatgctgggaaggtcaaataccaaataaaggatttccgggagaaaaatcacgac
caagtccgtgaggatctgattaatttagtgaggacgaccaactccagtttcctccagggt
attttgtccaaatcccccgctgcagttgttaggtggggtgtgttacgagccactgtgcgt
gctacctatgcattcaggaatgcaggaaaaggaaaattagcccccctcacaccacacaca
gtaacagatagatggctgggtaaacaagtggaaacggaagaaaagatgaatcaagctgct
tatgtacatcggaaaatgttggctcggttatccctccaacaaacttctgtgtcttcctca
tcctccggatcagaatcatcaagggagggaagcttctatgggaggcggaaggtgaacgca
acatccagaggaagaaagaagaccaacagcatcacccagcaataccaggcatcactgggc
tcacttatggcaacactggagaaagctcatccattctttgtgcgctgcattcaacctaac
agtaaaaaggctgcgttaaaactggacgacaagttggtcctccaccagctccggtgctcc
ggactccttcaaaccatccagcttcatcaatctcgttatccagaaaggatgtcgcttgaa
aagttctcatctcaattcaaattactgatgccacaccaggagatcactttatcaggaatc
agcaacttcctcatctcgatcggattaaaacctgggaagcatttccagaccgggaggacc
cagctcttccttcgcgatcatgcatcccgcatcctcaaagagtcgttgcacgaagttgtc
ctcaagcatgtggtcctcctccaatccaggatcagaggatgcatttgtaggaggagctac
ctccaacaaagatcagcagcaattaaaatacaatcctactggaggatgttggaagctcag
cgggaaatcgtggagtggcatcttgcagcttctattatacaggatgcgtggagatgttat
ttagcacagaagtttgaaggtttaatggttcagtttcaagcttgtatccgggggtacttg
gtacgaaggagagtccaggatgcaaggaggaagagggtagaagaggaagatgatcaatct
gcccgcatcattcagcgatcctggaagaactacaggagcaaaaaaagatcaaacgctgcc
gtgatcatccaaagaatatacagaggacatcaagctcgaacgctgtataaaaatatgcag
gaaatcaaagaaaatgaaaaaggagctcaagtggatgtaaaagaaatcttgaaaaccaaa
actgaaacctcacaagaccccaccaaacctgccagcgttgaaaaagaaaaatcaacaaaa
tcaacaccaacattcaacgacacaaacaacaatcacgaaccatgttgccaagaaccaaag
ccgcaaccggacgaaccccccactggccccaggccccagttcaggcctcggaccaaagcg
ggtgaagtcttcttacaagctgcgtacccaaaaagtaaaattgaagtcgttaaaccagtg
gtgtacgttccttcaagcaagaggaagtccacagatgaggtcctggatggatggagcaaa
tcttatgatcttaagaagtcgaataagagtccggagccagggaggttccaatacacagct
cctgcatctaagtccaaacccccgcctgaggaaaaaaatgaaaaattaggaaaaaatgaa
gatttttcaaaaagtgttaaaccatctaaaaacaaacgttttttaaaacatggtcaaata
tcgacaaataaagatctggctgttggagaaaatttatcatcaagtttagtgaataatact
gtgtctgttgaagctgacgcgaagaaatccaatgaagttttaaaactcgatgatattgaa
ataaatacagacaagacggacaagaattacatggaaacaacatttccggcgaaagttgaa
ccccagaggaaacaatcgaaagaacttgctcgtctcgagaaggagtggctggctttccag
cgggtggagcaacagaggcaactcattgatcttaacaggagtcaggatggagtgaggagg
aggaataaacaagatcagaggatcagagatgaaataacttctttaaggttggagcaaatg
aacaagttgagtcaacaacttaaaacctttggtgttggagcagaatccatgccgatgctg
gaaacaactccattttcaagaaatccttcaaatacaagcgattcttccactcctccacaa
tcaccattaaaactggaaagtgatgcgcaacacattttgccggataagccaatgatgcca
agcaaatccttggtcccaaccaaaacagttttgcaaaatgcaactgaagcgcagagcaaa
ccagtggtgccagataacaaatcagattcaacatctaaaccaacagaggtatctgaacct
gctcagaaagaaaatggcctggcaacacaaaacccaaccaacccagtatttgcgagaagt
ctttcaatggagagtgttgccaaagaaatgccacggcgccaacgtagcaactcagcaata
gaggcgtacgtcgcttccaagttacaacccccatccactgacccagtggcaaggaaatca
gcgtcactaagcgctgaagctttcgccaagaaatgcatgcatgaccagggtgaaacaacg
cacgtagaacatggccaagatttagaccaaccagagttgcaaaatcaagtggatggggta
aaacggggcagtgcgtttattgaggcaatgaggaaaactttctggggttcaagtaggggt
caaaaccgctctcacccatatcttgctgaaaagaaatcaacagacagtgttatatcagca
catggaggatcatccgagaaactccaccatccagaagatcatgctgtcaacatcaagtcc
ttggaggaagagcaattctctccaaagctcctcgtctccagtgcggatgaacttcttctt
cttgatgactttattaagagcaagacttccaacttcaaaggagacaacttagttgatcaa
gttttcaaaatctcgttgaacgaattttgtgcgaacctcacagctctgtactcactaaca
acgctaagtggtgacactaatggtctaagatacaaagatattgttgccaactttagacag
gtgctcgaaaaaacagcgaaccattattccttggaccaatacgctgcgatgatgggggtg
aatggtttccgtggttacatgaatgagtttatgaatgacgttcgaccgaaatatacaaag
gaaacaaaatcaaaacgaaagaaaattaaagatgactcagtggaaaaactcggccacagt
tttgctggtgtgcagtggggaatcactcaagtttgtgaattttgtggaaacacgatgtgg
ttgatggaagcaggacttgtgtgtaaaatttgcaagttcgcttgccacaaaaagtgcttc
aaacaactgaccactaggtgtcctggttccatggaggggggaagacagaaatcgaggccg
aagaaattgttcggagaatctttggcaagtctcgcttcaaaagatgggctagttcccact
ttcattgataaatgcatcagttacatggagatgaatgggatttatcaggaaggtatttat
cggaaatctgctgcggctactcagaataaattgttggaagaatcgctcaataaggacatc
gagtgtcagaaggtaaattttgacgactacaacattcactccgttgcctcgtgttttaag
aagttcctgcgttcgctgccgagccccttggttccttacgacaaatattttgaattcctt
caatctgctcgtttaaaaaatgatcgcgaaagagtgaatgctctgtaccacgtcttggag
ggaattccccagcagaaccatgccacactcgaacgcattgtgttccacttggcacgagtt
gcacaacaggaaccgacgaaccgcatgtccccgagcaacttggcgatcgtgttcactccg
tgcttctttgcggccccgacgcacgtgtcaccgattgaagcagctgaacatgttggggat
atgacaaaagcagtggagtgcgtgatcactgaacaagtgaagaaagtccggagcacactg
gagagtatctcggagttacagagcgtagaaagctcaacgaatgaaagattgaaacagatt
cgacaatctatggggaaaggaaagaaaagaagaattcggccgtcaatccagtccggacct
cgctccccccctcatcggaggcctctcgctgatcccaagctggatgtagtggaggaggac
actgatctcatgaagcaggagatgcagtatgagaagaagatcgcgactctgcggagcaga
aaggaatccctcacaaatagactcccagctttaactccacaactaccagatgataatcat
catttccttaatgaagatatcacatttacttatccagcaatagttaaaaacattcacctg
cggcacctcaacaagcatcgagccatgacccctcactcgcggcgccgacccaccaaatat
tcctcatctttatacagcaagaaagccatggcaccggtgccagaggaagtgaagccaccg
ccacgacgagtgtcagccaagggaaagtttaaacgactcgcatcagctgttcagcttcaa
gacgacaaggattcatttaccaggtcatcacttattcgaaacccaattcatcggcctcat
aaaaaacgaggaaatgcagctgatcttcttgccagtaaagcttctcagcttagcaaagtg
acaagtgtgtaa
DBGET
integrated database retrieval system
