Ciona intestinalis (yellow sea squirt): 100178041
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Entry
100178041 CDS
T01056
Name
(RefSeq) myosin-binding protein C, cardiac-type-like isoform X2
KO
K12568
myosin-binding protein C, cardiac-type
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100178041
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Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
FN3_DSCAM-DSCAML_C
V-set
THB
C1-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
100178041
NCBI-ProteinID:
XP_002130191
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All DBs
Position
1:complement(2048068..2084214)
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AA seq
1176 aa
AA seq
DB search
MPVPGADPAKKILKKKVVKKVVKKRKESVAEKAPAKDVAPKAEEKPVPAPEPVKVDKPKE
APVVVETSEVKTPEKPTEETPVTNGIVEAPENATTTEGVEVTVRVKVMHIDVLHAMKVIW
IKGKWKELTKGDRYDMWCNERTGEHFLKFRQPKVSDGGSYKVKAVSPIGENEASFNVAVG
PPVVEEHKIEIKKGYVPDEKDVLKDVDFRNRLKKVERLRKEESSGKFDIWSLLKTASTRD
YESIAFKFGIPDMRIMLRRLSQMSKLANKKCPSFTKKLPESHSLNLGEKLVLEAEVANEQ
MTVKWLKNGNEITPGKGYQIVTKANKRYLMIDQTSKDDDATYTCVVGKDVTACEVFVQEP
PVTIVKGLEDAQIACGETTEFCCEISNENGKFRFLKDGVDIPSNDRFKVKKEGVKVTLTI
TEAVIEDEGFYQFMTNGSSSCSELLVQEPAAVFTRAFSDLKVNFKETAEFFCEVSNETTK
GNWLKDGKPMKADDRVKITETGKARKLVISGVKDSDQGEYTFAAEDNPTCSITAALEMTG
GHITVERKKAPPKIFLDHSLKDRSIQVRAGNKIKLDIPISGEPAPVPEWKKGPKDGKQIQ
LVQTGKRVWTNTSTEHGITSLVIVDSHLEDSDEYYCDLVWDKEKLEGGDSEYIKRQEIQF
KLQFVDVPSAPTVPKVSNVTAETCYAVWTGPSCNGGCEIKGYVMERKKTKSERWIRLNFD
PLQGVEYEARRMIEGTEYQLRVRAVNEVGVGEPSPASIPFTPLAPCSEPSGFKVSAATDD
SLELSWLPPADIGAAGLDGYLLEQQLVGEEDEKWTTVQSNGGLLPNNTSKILMDKLVTGK
KYRFRLAAINKAGSSGFTEIGPVVCAAVVEEAKIVLPRHLLKPVKVKVGGKLHVNVPYQG
RPKPQLTWSKEGKALEDHVAVRNSLDSSVLFIRTAERWDSGKYDLQLKVGDDVVGAKVEV
AVIDIPSKPRQVKLVEVVGNSASLKWEEPNDSGNTEILGYIVEKRDARSDDWYVVYDKLR
HKQCQVSDLVLGNNYFFRVRAFNEVGTGESNGTKDSANIPKEKTVYKKPDYAPMDFRMKP
EFTQLLNGRRIVENYNGTLSCALKCNPRPKIKWFKNKIEIIDNPKYKMTQSMGIVQLEIR
RARAGDAGNYTVTAINELGEASCSAEVTVKELKSQG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgccaggagcagaccccgcaaagaaaatcctgaaaaagaaagtagtgaagaaa
gtggttaaaaaacgcaaggaaagcgtggcagaaaaagcacccgcaaaggacgtagcccca
aaagctgaagaaaaacctgttccagccccagaacctgtaaaagttgataaaccaaaagaa
gccccagttgtcgttgaaacttctgaagtcaaaactcctgaaaaaccaacggaggagacg
ccagtgacaaacgggatcgtcgaagctcctgaaaatgcaactacaactgaaggcgtggag
gttacggtccgagtaaaagtgatgcacattgacgtgctgcatgctatgaaagttatttgg
atcaaagggaaatggaaagagttgacaaagggcgacagatatgacatgtggtgcaacgaa
cgcactggggaacattttttaaagtttcgtcagcccaaagtttctgatggtggcagttac
aaagtgaaagccgtgtcgcctattggggaaaatgaggcgtcttttaacgtggccgttgga
cctccagtggttgaagaacacaaaattgaaatcaagaaaggatatgtccctgatgaaaaa
gatgtcttaaaggatgtagacttccgaaaccgactcaagaaagttgagcgcttacgtaag
gaagaaagttccggcaaattcgacatttggtctttgctgaagactgcatctactcgcgac
tatgagtcgattgcgttcaagtttggaatcccagacatgcgtattatgctacgaagactt
tcgcaaatgagtaaactggccaacaagaagtgcccgtcatttaccaaaaagcttcccgaa
agtcattctcttaatcttggtgaaaagttggtacttgaagcagaggtggctaacgagcaa
atgacagtaaagtggctcaaaaatggcaacgaaattaccccagggaagggttaccagatt
gtaactaaagcgaacaagagatacttgatgattgatcaaacctccaaggatgacgatgcc
acttatacttgtgtggttggtaaagatgtaactgcgtgtgaggtgttcgttcaagaacca
ccagtcaccattgtaaagggattggaggacgctcaaatcgcatgtggagaaactaccgaa
ttttgctgcgagatctctaacgagaacggcaaatttcgcttcctcaaagacggtgttgat
attccgtccaacgatcggttcaaagtaaagaaagaaggcgtgaaagtgactttaactatt
actgaggctgtgatagaagacgaaggattctaccagttcatgactaacggaagctcaagt
tgttccgagttgttggtgcaggaaccagctgctgtgttcactcgggctttctctgacctt
aaagtaaacttcaaagaaactgcggagtttttctgcgaagtctcaaatgaaaccacgaag
ggaaattggttgaaggacggcaagccaatgaaagctgatgaccgagttaagattactgag
accggtaaagctcgtaagcttgtcatatccggcgtgaaagattccgaccaaggtgaatac
acttttgctgcagaagataacccaacatgctccattactgctgcgcttgaaatgactggt
ggacatatcaccgttgaacgaaagaaggctcctcccaaaatcttcttggatcactcttta
aaagatagatccattcaagttagagctggtaacaagatcaagttagacattcccatctct
ggggaacccgcaccagtacccgaatggaaaaaaggacctaaggacgggaagcagattcaa
ctagttcaaaccggaaaacgggtttggaccaacacaagcactgagcatggcatcacttcg
cttgtcatcgtcgattctcacctcgaggatagtgacgaatattattgtgacttggtttgg
gacaaagaaaagcttgaaggcggagactctgaatatattaaacgacaagaaattcagttt
aaacttcaatttgttgacgtaccaagtgcaccaactgtcccaaaggtatcaaacgtgaca
gcagaaacatgttatgctgtttggactggaccttcatgcaacggcggttgtgaaattaag
ggttacgtaatggagagaaagaagacgaaatccgagagatggattcgtcttaacttcgac
cctctgcaaggagtagaatacgaagcaagaagaatgattgaagggacggaataccagttg
agagtacgagctgtgaatgaggttggggttggagaaccaagtccagcttctataccgttc
actcctctcgcaccttgtagcgagcccagcggttttaaagtatctgccgccactgacgac
agcttggagctatcatggcttccaccagcggacataggagcggccggtctcgacggatat
ctgcttgaacaacaacttgtcggcgaagaagacgaaaaatggacaaccgtccaatcaaac
ggaggtctattacccaacaacacctctaaaatcctcatggataaactggtcactggaaag
aaataccgttttcggttggcagcaatcaacaaagctggatccagcggtttcactgagatt
ggtcctgttgtgtgcgctgcagtagtcgaggaggcaaagatcgttcttcctcgtcattta
ctcaagccagtaaaggtcaaagttggcggaaagcttcacgttaacgtgccataccaggga
cgaccaaagcctcaactcacatggtctaaagaaggaaaggctctcgaagatcacgttgct
gttcgaaactctctcgattcctccgtcctcttcatcagaacagctgagagatgggattct
ggcaaatatgatctacaacttaaagtcggagatgatgttgttggagccaaagtggaagtg
gcagtgattgacattccttccaaacctcgccaagttaaacttgtcgaagttgtcgggaat
tctgcttctcttaagtgggaagaaccgaacgattcgggcaacactgaaatacttggatac
attgtggagaaacgagacgcacgaagcgacgactggtacgtcgtgtatgacaaactccga
cataagcagtgccaagtaagcgaccttgtacttgggaacaactatttcttccgggtgaga
gcttttaatgaagtgggaaccggagagtcaaatggaaccaaagacagcgctaacatacct
aaagaaaaaaccgtgtacaagaaacccgactatgctcccatggacttccgtatgaaacct
gaatttacccaacttctaaacggtcgacgcatcgtggaaaactacaacggtacactcagc
tgcgcccttaaatgcaacccccgccctaaaatcaagtggtttaagaacaaaattgaaatc
attgacaacccgaagtacaagatgacgcaatccatgggcattgtgcaactggaaattcgg
cgggcacgagcaggagacgctggcaattacacggtgacagcaatcaatgaactgggcgag
gcctcgtgttctgctgaagtcaccgtcaaggagctgaaatcccaaggttga
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