Ciona intestinalis (yellow sea squirt): 100178077
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Entry
100178077 CDS
T01056
Name
(RefSeq) hemicentin-1 isoform X3
KO
K06547
activated leukocyte cell adhesion molecule
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cin04515
]
100178077
04090 CD molecules [BR:
cin04090
]
100178077
Cell adhesion molecules [BR:
cin04515
]
Immunoglobulin superfamily
ALCAM
100178077
CD molecules [BR:
cin04090
]
Proteins
100178077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
Ig_4
CRF-BP
Biotin_lipoyl
Motif
Other DBs
NCBI-GeneID:
100178077
NCBI-ProteinID:
XP_002120885
Ensembl:
ENSCING00000005393
LinkDB
All DBs
Position
4:complement(347302..355604)
Genome browser
AA seq
614 aa
AA seq
DB search
MMICIRIVLGLFFIAKCSAQITFMLQNVTAEVGSDAVIPCIYETVGLEGMIPTIRWYAQQ
ESSRPRLYVFVQGDEGSTFKGKGITRNLTIGMDGSLIIPQVTLADNDEFSKLVCEVDFAS
GGQAEGPLTFGVYSFPTTEPVTTSDLTEFESSEEKVIVGSCESGSGYPEPVITFYKGSEL
ISSNSGDEKVNEGEANDFLNVFNSGIIKTSETDGTTSVKKTLSIPLSKADDNMQFYCVVT
TTMGSESKMQNATMPLFRVKYPTDEVTVTSDSNMIEIGDTIMLTCEGNGYPEPSITSFNE
GTSSTISVTVTKEDNNRVIECTATNPTSVPVTGSYTINVNYLDTPMITGSEIVKLGAAFE
LSCASSGNPQVSSIMWKKNGQDYSQSNPINVASAAFSDQGLYQCVATNGDKTATQEIEVT
VNGLSVNNEEKIFESIDSGNTAEMVCVAEANPAPSFVWARVGSEEEVTEAILTQNGMTYT
STLTVGPLDKTFSNVKYTCTVSADGETVEKSFVLPEIETDKPEKEILDKSGSPTAGIIIG
ILVALLVVAIIIAVLYNKGIICNKGEKGDENAEDIAVEINKDDAANDDVEAARKPEDAAE
PEEDTRLVNGNGDQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctgcattcgtattgtattgggcctattttttattgcaaaatgcagtgctcaa
atcacttttatgcttcaaaatgttacggccgaagttggcagtgatgcagttataccatgt
atatatgaaactgttgggcttgaaggcatgataccaacgatcaggtggtacgcacaacaa
gaaagtagcagaccacgtctctacgtattcgtgcaaggtgatgaaggatcgacatttaag
ggaaaaggcatcacaagaaaccttaccattgggatggatgggtcacttatcattccccaa
gtaactctcgccgataatgatgaattttccaagctagtttgcgaagtagattttgccagc
ggtggccaagctgaaggtccccttacttttggtgtttattcattccctactactgagcca
gttacaacaagtgacttgactgaatttgaatctagcgaagaaaaagtcattgtcggtagt
tgtgaaagtggaagtgggtatcctgaaccagtgataacattttacaaaggatctgagctg
atcagtagtaatagcggtgatgagaaagttaacgaaggtgaagctaatgactttctcaat
gtattcaactctggaataataaaaacctccgaaacagatggcactacctcagtaaaaaaa
actctcagcattccattaagcaaggcggacgataacatgcaattttactgcgttgtcacc
acaaccatgggaagcgaaagcaagatgcaaaatgcaaccatgccattattcagagttaaa
tacccaactgatgaagtaacagtaacaagtgattctaatatgattgagatcggtgatacg
atcatgcttacatgcgaaggaaatggttatcccgaaccaagcataacaagcttcaacgag
ggaacttcttcaacaataagtgtcacggtcactaaggaggataacaacagagtgattgaa
tgcacagccaccaacccaacatctgttccagttactggaagttatactattaatgtaaat
tatcttgacacacctatgataactggaagcgaaattgtaaagctcggtgcagcatttgaa
ctctcttgtgcttcaagtggaaacccacaagtttcatctattatgtggaaaaagaacggc
caagattattctcaatcaaatcctatcaatgtggcatcagctgcgttttctgaccagggt
ttataccagtgtgttgctactaatggagataagacagctactcaagaaattgaagtgaca
gtcaatggattgagtgttaacaacgaggaaaagatctttgaatcaatcgactctggaaat
actgcagaaatggtttgtgttgctgaagctaaccctgcaccaagctttgtgtgggcacgt
gttggctcggaagaggaagtcactgaagctattcttactcaaaatggaatgacatacaca
agcacattgactgtgggaccacttgataaaacattttcaaatgtaaaatatacttgtacg
gtgtcagctgatggagagactgtagaaaagtcatttgttttaccagaaatagaaacggac
aaaccagagaaagaaattcttgacaaatctggttctccaactgctggtattataattggc
atccttgtcgctttgctggtagttgccatcatcattgctgttttatataacaaaggaatt
atatgcaacaaaggagaaaagggtgatgagaatgcagaagatattgccgtggaaatcaac
aaagatgatgcagctaatgatgatgtagaagcagcgcgtaaacctgaagatgctgctgaa
cctgaagaagacacaagacttgttaatggaaacggtgatcaatga
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