KEGG   Ciona intestinalis (yellow sea squirt): 100178077
Entry
100178077         CDS       T01056                                 
Name
(RefSeq) hemicentin-1 isoform X3
  KO
K06547  activated leukocyte cell adhesion molecule
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cin04515]
    100178077
   04090 CD molecules [BR:cin04090]
    100178077
Cell adhesion molecules [BR:cin04515]
 Immunoglobulin superfamily
  ALCAM
   100178077
CD molecules [BR:cin04090]
 Proteins
  100178077
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig C2-set_2 V-set Ig_5 Ig_4 CRF-BP Biotin_lipoyl
Other DBs
NCBI-GeneID: 100178077
NCBI-ProteinID: XP_002120885
Ensembl: ENSCING00000005393
LinkDB
Position
4:complement(347302..355604)
AA seq 614 aa
MMICIRIVLGLFFIAKCSAQITFMLQNVTAEVGSDAVIPCIYETVGLEGMIPTIRWYAQQ
ESSRPRLYVFVQGDEGSTFKGKGITRNLTIGMDGSLIIPQVTLADNDEFSKLVCEVDFAS
GGQAEGPLTFGVYSFPTTEPVTTSDLTEFESSEEKVIVGSCESGSGYPEPVITFYKGSEL
ISSNSGDEKVNEGEANDFLNVFNSGIIKTSETDGTTSVKKTLSIPLSKADDNMQFYCVVT
TTMGSESKMQNATMPLFRVKYPTDEVTVTSDSNMIEIGDTIMLTCEGNGYPEPSITSFNE
GTSSTISVTVTKEDNNRVIECTATNPTSVPVTGSYTINVNYLDTPMITGSEIVKLGAAFE
LSCASSGNPQVSSIMWKKNGQDYSQSNPINVASAAFSDQGLYQCVATNGDKTATQEIEVT
VNGLSVNNEEKIFESIDSGNTAEMVCVAEANPAPSFVWARVGSEEEVTEAILTQNGMTYT
STLTVGPLDKTFSNVKYTCTVSADGETVEKSFVLPEIETDKPEKEILDKSGSPTAGIIIG
ILVALLVVAIIIAVLYNKGIICNKGEKGDENAEDIAVEINKDDAANDDVEAARKPEDAAE
PEEDTRLVNGNGDQ
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgatgatctgcattcgtattgtattgggcctattttttattgcaaaatgcagtgctcaa
atcacttttatgcttcaaaatgttacggccgaagttggcagtgatgcagttataccatgt
atatatgaaactgttgggcttgaaggcatgataccaacgatcaggtggtacgcacaacaa
gaaagtagcagaccacgtctctacgtattcgtgcaaggtgatgaaggatcgacatttaag
ggaaaaggcatcacaagaaaccttaccattgggatggatgggtcacttatcattccccaa
gtaactctcgccgataatgatgaattttccaagctagtttgcgaagtagattttgccagc
ggtggccaagctgaaggtccccttacttttggtgtttattcattccctactactgagcca
gttacaacaagtgacttgactgaatttgaatctagcgaagaaaaagtcattgtcggtagt
tgtgaaagtggaagtgggtatcctgaaccagtgataacattttacaaaggatctgagctg
atcagtagtaatagcggtgatgagaaagttaacgaaggtgaagctaatgactttctcaat
gtattcaactctggaataataaaaacctccgaaacagatggcactacctcagtaaaaaaa
actctcagcattccattaagcaaggcggacgataacatgcaattttactgcgttgtcacc
acaaccatgggaagcgaaagcaagatgcaaaatgcaaccatgccattattcagagttaaa
tacccaactgatgaagtaacagtaacaagtgattctaatatgattgagatcggtgatacg
atcatgcttacatgcgaaggaaatggttatcccgaaccaagcataacaagcttcaacgag
ggaacttcttcaacaataagtgtcacggtcactaaggaggataacaacagagtgattgaa
tgcacagccaccaacccaacatctgttccagttactggaagttatactattaatgtaaat
tatcttgacacacctatgataactggaagcgaaattgtaaagctcggtgcagcatttgaa
ctctcttgtgcttcaagtggaaacccacaagtttcatctattatgtggaaaaagaacggc
caagattattctcaatcaaatcctatcaatgtggcatcagctgcgttttctgaccagggt
ttataccagtgtgttgctactaatggagataagacagctactcaagaaattgaagtgaca
gtcaatggattgagtgttaacaacgaggaaaagatctttgaatcaatcgactctggaaat
actgcagaaatggtttgtgttgctgaagctaaccctgcaccaagctttgtgtgggcacgt
gttggctcggaagaggaagtcactgaagctattcttactcaaaatggaatgacatacaca
agcacattgactgtgggaccacttgataaaacattttcaaatgtaaaatatacttgtacg
gtgtcagctgatggagagactgtagaaaagtcatttgttttaccagaaatagaaacggac
aaaccagagaaagaaattcttgacaaatctggttctccaactgctggtattataattggc
atccttgtcgctttgctggtagttgccatcatcattgctgttttatataacaaaggaatt
atatgcaacaaaggagaaaagggtgatgagaatgcagaagatattgccgtggaaatcaac
aaagatgatgcagctaatgatgatgtagaagcagcgcgtaaacctgaagatgctgctgaa
cctgaagaagacacaagacttgttaatggaaacggtgatcaatga

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