Ciona intestinalis (yellow sea squirt): 100178079
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Entry
100178079 CDS
T01056
Name
(RefSeq) sperm-associated antigen 16 protein
KO
K24735
sperm-associated antigen 16 protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100178079
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
Sperm associated proteins
100178079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR19_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
KIF9
Motif
Other DBs
NCBI-GeneID:
100178079
NCBI-ProteinID:
XP_002129270
Ensembl:
ENSCING00000014757
UniProt:
F6TQ79
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Position
7:complement(6086073..6091633)
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AA seq
606 aa
AA seq
DB search
MTSEAEDGPFFLEKVSVLGDSDDEYQYEEVPVDDLSVGSTDHLDGFDKTILSIEESKQDE
KAAIRVEGPPVASLIHRPEVIDDFVRNFLLRMGMKRTLQSFQTEWYEMQQKGLLGNEDIG
VVPDAYCRNQTLGDEVKRLKSELQKYMTAASKAKDTHVKLQKERDFHRINHKRAVQEKNR
LITDIKRLKKHYNSYEPTLRELKHKYELAMKEKMLTKLERDRAVGQVTGLQATLRNLETG
KEVMLPPVSGYRAQRSANRGGPTQSALREARGSVENKREQPKTSNTQDSEFPTDSRVNPY
LTHAKGPPTHLTRTGGFRQTGSIRGHDLAISSVSLHPRKQIAVTTSDDHQWKMWAVPSGD
IIMTGEGHTDWISDSDFHPSGAQLATSSGDACVKVWDFSKASCVLTLPDHTHAVWGVSWH
SCGDFLASCSMDNTSKIWDVHSERCRSTLRGHADSVNSIQFLHFANTLLTASADKTLSLW
DARTGLCAQTFYGHLHSVNNAVFNLKGDTIGSCDSYGTVKFWDVRHVAPMITVDVGPHPA
NRVAFDPSGHLLAVASNDGTIKMVEVGTSDVTMLAGHDDAVQAVTFDIGGQFMLSGGSDG
SMRVWS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagaagctgaagatggaccgttttttcttgaaaaagtttccgttcttggggat
tctgatgatgaatatcaatatgaagaggtccctgtggacgacctgagcgttggctctact
gatcatcttgatggctttgataaaacgattctttcaatcgaggaatcaaaacaagatgaa
aaagctgccatccgcgtagagggccctccagtggcctcgttgatccaccgccccgaagtg
atcgatgatttcgtccgaaactttttgcttcgaatgggaatgaagagaacgcttcaaagt
ttccaaacagaatggtacgagatgcaacagaaggggttgctcggcaacgaggatattggg
gtcgtgccggatgcttattgcaggaaccagacactaggggacgaggtgaaaagattgaaa
tcagagttacagaaatacatgacggctgcaagcaaagccaaggacactcacgtcaagttg
cagaaagaacgagatttccaccgaatcaaccacaagagggcagtgcaggaaaagaatcga
ctaattaccgatataaagaggttaaagaaacattacaattcatacgaaccaacgttgagg
gaacttaaacataaatacgagctcgctatgaaagagaagatgttgaccaagctggagagg
gatcgcgctgtggggcaggtgactgggttacaagctactttgcggaatttagaaacgggt
aaggaggttatgctgcccccggtgtcggggtatcgcgcgcaacgatcggcgaaccgtggt
ggtccgacacaatcagcattgcgcgaagctcgggggagtgtagagaacaaacgggaacag
ccgaaaacatcgaacactcaagatagtgagttccccacagactcgagggtcaacccatat
ttaacccacgccaagggacccccaacccacttaacaaggacggggggtttcaggcaaacg
gggtcaatcaggggtcatgaccttgcaattagcagtgtctcgttacaccctcgtaaacag
atcgcggtaacaacatctgacgaccaccagtggaagatgtgggcggtacctagtggtgat
attattatgacgggggagggacacacagactggatatccgactcggatttccacccaagt
ggagcgcagctagcgacctctagtggtgacgcttgcgtcaaagtttgggatttctcgaaa
gcttcgtgcgtgctcaccttgcccgaccacacccatgcagtgtggggggtgtcgtggcac
tcgtgtggcgacttcctggcttcttgttccatggataatacatcaaagatatgggatgtg
cacagtgaaaggtgtcgttccacgcttcgcggacacgcagattctgtcaacagtattcag
tttctacatttcgcgaacaccctactaacagcatcggccgataaaactttgtcattatgg
gatgctcgtaccggactttgtgcacaaacattctacggccatcttcactccgtcaacaat
gccgtatttaaccttaagggtgataccatcggatcgtgcgacagttacgggacggtcaag
ttttgggacgtgcgccatgttgccccgatgatcaccgtggatgtgggacctcaccccgct
aatagggtcgcgtttgacccatcaggccacctcctggccgttgctagtaacgacggaacg
ataaagatggttgaagttggtacgagtgatgtcacaatgctagcgggtcacgacgacgct
gtgcaagccgtgacctttgacatcgggggtcaatttatgttaagcggggggtcagatggg
agtatgcgagtttggtcgtaa
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