Ciona intestinalis (yellow sea squirt): 100178081
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Entry
100178081 CDS
T01056
Name
(RefSeq) ras-related protein Rab-6A
KO
K07893
Ras-related protein Rab-6A
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178081
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100178081
04031 GTP-binding proteins [BR:
cin04031
]
100178081
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
100178081
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
100178081
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100178081
Exosomal proteins of bladder cancer cells
100178081
GTP-binding proteins [BR:
cin04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
100178081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
SRPRB
MMR_HSR1
RsgA_GTPase
FeoB_N
Gtr1_RagA
CPT
ATP_bind_1
ThsB_TIR
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
100178081
NCBI-ProteinID:
XP_002121682
Ensembl:
ENSCING00000002960
UniProt:
F6R3W0
LinkDB
All DBs
Position
7:271719..275705
Genome browser
AA seq
209 aa
AA seq
DB search
MTSDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV
RLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIM
LVGNKTDLSDKRQVSIEEGERKAKELNVMFIETSAKTGYNVKQLFRRVAAALPGMENSPD
KEKNVMDEVILDRKPQPEPTQSSESMCGC
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgatttcggaaacccccttagaaaattcaagcttgtctttctgggtgaacaa
agtgttgggaaaacatctttaataacgaggtttatgtatgatagcttcgataacacttat
caggcaactattggaatagatttcttgtcaaaaacaatgtacttagaagatcgcacggta
cgactgcaactttgggacacagctggccaagaaagatttcgaagcttaattccgagttat
atcagggattcaactgttgcggttgttgtttatgacatcacaaacgtcaactctttccaa
caaacttcaaaatggattgatgatgttcgaactgaacgtggaagtgatgtcataataatg
cttgttggaaacaaaaccgatttatctgataaaaggcaagtttcgatagaagagggtgaa
agaaaagcaaaggaattgaatgttatgtttattgagacgagtgccaaaactgggtataat
gtgaagcagttgttcagaagggtggctgctgcactgcctggcatggaaaattcacccgac
aaagagaagaatgtcatggatgaagtaatactggataggaaacctcaacctgaaccaacc
caatcatcggaaagcatgtgtggatgctga
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