KEGG   Ciona intestinalis (yellow sea squirt): 100178085
Entry
100178085         CDS       T01056                                 
Symbol
sepn1
Name
(RefSeq) selenoprotein N, 1
  KO
K19874  selenoprotein N
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100178085 (sepn1)
Membrane trafficking [BR:cin04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    100178085 (sepn1)
SSDB
Motif
Pfam: EF-hand_1 EF-hand_6 EF-hand_5 EF-hand_7 DUF6548
Other DBs
NCBI-GeneID: 100178085
NCBI-ProteinID: NP_001177172
LinkDB
Position
2:complement(864723..872833)
AA seq 580 aa
MLRNRKSRIKENVKREEKVTANDEKQQADKPTEVPHSISENKKKEPNDKCLTFVVVFAAA
VIAIALGLQVYVYSIIQENAKNAAVRQLGQHGLKLFKEYDINKDMQIDPKEFRQLYDFIL
SEDILKASHEVEEEITKEIFDPSTDEIVQLKADMIPLVLSSMSQTNKNPAFGTPLFHYSK
DFSGLVAWKSVKTEQKDLYAKEFKAFLPNNSSQLVGEPYWLIQRPNNPEELTSNRYRYPI
PKTKIEKLLHNLLVMFHPRPFVTMRFSPQGAAAVIRAQNQVYLEIVFRFHSEFQLNEPPY
LPYWFTPAQFTGRLIIARDGTHVRGFQLYVPNNKKLNVDMEWETNDPNAPENNMEVDIGF
LPLMTINQTQPSSPMILNNDDGTSIDRRELIKQGKDIVVEFDEIQWKDDAITTQYAHGQL
EKLFFPFKKVDYLPFNEAFKRASVENKLIHQVVLWGALDDQSCUGSGRTLRETALESSPV
IQLLNQSFISTWSLLKDLEVISNDKQSPLSNVANLSIEAYKFPVQMMVILPNGTVISSLN
ANDWLAQANGEVPVDEKWLSLGSKDYNTFLSNALEASKNL
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgctaagaaatagaaaaagtaggattaaagaaaatgtcaaacgtgaagaaaaagtcacc
gcaaatgatgagaaacaacaagccgataaaccaacagaagtgcctcacagtatttctgaa
aacaaaaagaaagaaccgaatgataaatgtctaacatttgttgtagtgtttgcagcagca
gttatagcaattgctcttggtttgcaagtttatgtttacagtatcattcaagaaaatgca
aagaatgcagctgttcgtcaacttggccagcatggtttaaaactttttaaagaatatgat
atcaacaaagacatgcagatagacccaaaggagttccgacaactgtatgactttatttta
tccgaagatattttaaaagcaagccatgaagtggaggaagaaataactaaagaaatattt
gacccaagcacagatgaaattgttcaactaaaagctgatatgataccacttgttttgtcg
tccatgagtcaaacaaataaaaatccagcatttggaactcccctgtttcattactccaag
gatttttctggtcttgttgcttggaaaagtgtaaaaacagagcagaaagatttgtatgcc
aaggaatttaaagcttttctaccaaataattcttcacaattagttggagaaccttactgg
ttgatccaaagacccaacaatccagaagaactaaccagtaatcgatacagatatccaatt
ccaaagacaaagattgaaaaacttcttcataatttgcttgtcatgtttcatccgcgacct
ttcgtgactatgagattttcgccacaaggtgctgctgctgtcatacgagcacaaaaccaa
gtttatctggaaattgtgttcaggttccatagcgagttccaactaaacgaacctccatat
cttccttactggttcacacccgcccagtttactggtcgtcttattattgctcgggatgga
actcatgttagaggatttcaactctatgtgccaaataataagaaactcaatgtggacatg
gagtgggaaaccaacgatccgaacgcacctgaaaataacatggaagttgatatcgggttt
ctacctttaatgacaatcaatcaaacacaaccatcaagtccaatgatattgaataatgac
gatggaacttctattgatagaagggaattaatcaaacaaggaaaggacattgtcgttgaa
tttgatgaaattcaatggaaagatgatgccattactacacaatatgcacacggtcaactt
gaaaagcttttctttccttttaaaaaggttgattatttaccgtttaacgaagcattcaag
cgagcttccgttgaaaacaaactcatccatcaggtggtgctatggggagcacttgatgat
caatcctgctgaggttcggggcgaactcttcgtgaaactgctctcgagagttcgcccgtt
attcaactgcttaatcagagcttcattagtacctggtctttactaaaggacttagaggtc
ataagcaatgataagcagtcaccattaagcaatgttgctaatctatctattgaagcttac
aagtttccagttcaaatgatggtcatacttcccaatgggaccgtgatttcctcattgaat
gcaaatgattggttggcacaagcgaatggtgaggttccggttgatgaaaaatggttgtca
cttggctccaaagattacaacacttttctttccaatgcattagaagcttcaaaaaacttg
tag

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