Ciona intestinalis (yellow sea squirt): 100178085
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Entry
100178085 CDS
T01056
Symbol
sepn1
Name
(RefSeq) selenoprotein N, 1
KO
K19874
selenoprotein N
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178085 (sepn1)
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100178085 (sepn1)
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Motif
Pfam:
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
DUF6548
Motif
Other DBs
NCBI-GeneID:
100178085
NCBI-ProteinID:
NP_001177172
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Position
2:complement(864723..872833)
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AA seq
580 aa
AA seq
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MLRNRKSRIKENVKREEKVTANDEKQQADKPTEVPHSISENKKKEPNDKCLTFVVVFAAA
VIAIALGLQVYVYSIIQENAKNAAVRQLGQHGLKLFKEYDINKDMQIDPKEFRQLYDFIL
SEDILKASHEVEEEITKEIFDPSTDEIVQLKADMIPLVLSSMSQTNKNPAFGTPLFHYSK
DFSGLVAWKSVKTEQKDLYAKEFKAFLPNNSSQLVGEPYWLIQRPNNPEELTSNRYRYPI
PKTKIEKLLHNLLVMFHPRPFVTMRFSPQGAAAVIRAQNQVYLEIVFRFHSEFQLNEPPY
LPYWFTPAQFTGRLIIARDGTHVRGFQLYVPNNKKLNVDMEWETNDPNAPENNMEVDIGF
LPLMTINQTQPSSPMILNNDDGTSIDRRELIKQGKDIVVEFDEIQWKDDAITTQYAHGQL
EKLFFPFKKVDYLPFNEAFKRASVENKLIHQVVLWGALDDQSCUGSGRTLRETALESSPV
IQLLNQSFISTWSLLKDLEVISNDKQSPLSNVANLSIEAYKFPVQMMVILPNGTVISSLN
ANDWLAQANGEVPVDEKWLSLGSKDYNTFLSNALEASKNL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaaatagaaaaagtaggattaaagaaaatgtcaaacgtgaagaaaaagtcacc
gcaaatgatgagaaacaacaagccgataaaccaacagaagtgcctcacagtatttctgaa
aacaaaaagaaagaaccgaatgataaatgtctaacatttgttgtagtgtttgcagcagca
gttatagcaattgctcttggtttgcaagtttatgtttacagtatcattcaagaaaatgca
aagaatgcagctgttcgtcaacttggccagcatggtttaaaactttttaaagaatatgat
atcaacaaagacatgcagatagacccaaaggagttccgacaactgtatgactttatttta
tccgaagatattttaaaagcaagccatgaagtggaggaagaaataactaaagaaatattt
gacccaagcacagatgaaattgttcaactaaaagctgatatgataccacttgttttgtcg
tccatgagtcaaacaaataaaaatccagcatttggaactcccctgtttcattactccaag
gatttttctggtcttgttgcttggaaaagtgtaaaaacagagcagaaagatttgtatgcc
aaggaatttaaagcttttctaccaaataattcttcacaattagttggagaaccttactgg
ttgatccaaagacccaacaatccagaagaactaaccagtaatcgatacagatatccaatt
ccaaagacaaagattgaaaaacttcttcataatttgcttgtcatgtttcatccgcgacct
ttcgtgactatgagattttcgccacaaggtgctgctgctgtcatacgagcacaaaaccaa
gtttatctggaaattgtgttcaggttccatagcgagttccaactaaacgaacctccatat
cttccttactggttcacacccgcccagtttactggtcgtcttattattgctcgggatgga
actcatgttagaggatttcaactctatgtgccaaataataagaaactcaatgtggacatg
gagtgggaaaccaacgatccgaacgcacctgaaaataacatggaagttgatatcgggttt
ctacctttaatgacaatcaatcaaacacaaccatcaagtccaatgatattgaataatgac
gatggaacttctattgatagaagggaattaatcaaacaaggaaaggacattgtcgttgaa
tttgatgaaattcaatggaaagatgatgccattactacacaatatgcacacggtcaactt
gaaaagcttttctttccttttaaaaaggttgattatttaccgtttaacgaagcattcaag
cgagcttccgttgaaaacaaactcatccatcaggtggtgctatggggagcacttgatgat
caatcctgctgaggttcggggcgaactcttcgtgaaactgctctcgagagttcgcccgtt
attcaactgcttaatcagagcttcattagtacctggtctttactaaaggacttagaggtc
ataagcaatgataagcagtcaccattaagcaatgttgctaatctatctattgaagcttac
aagtttccagttcaaatgatggtcatacttcccaatgggaccgtgatttcctcattgaat
gcaaatgattggttggcacaagcgaatggtgaggttccggttgatgaaaaatggttgtca
cttggctccaaagattacaacacttttctttccaatgcattagaagcttcaaaaaacttg
tag
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