Ciona intestinalis (yellow sea squirt): 100178087
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Entry
100178087 CDS
T01056
Name
(RefSeq) ileal sodium/bile acid cotransporter
KO
K14342
solute carrier family 10 (sodium/bile acid cotransporter), member 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100178087
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
100178087
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GFIT
Motif
Pfam:
SBF
SBF_like
Mem_trans
DUF4260
Motif
Other DBs
NCBI-GeneID:
100178087
NCBI-ProteinID:
XP_002123935
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Position
1:complement(1199540..1211373)
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AA seq
384 aa
AA seq
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MIQTNMNPTTIATPPCVLEESSNASLSGIVCSNVTIGIPVVDNSELVAASEATRIATSVL
IALIMFGFGCSVEPKKALAYCKKPKQFITALALQLLGMPLLGFGLSQAFRMTPPEAAGVY
IQASCPGGTYSNLAAYWVDGDLNLSVLMTTMSTILSMGTLPLWLFLFPLMANTGDTLKVP
FDQLGYALLGIIPPLLVGIPVNYKFPKRAPLITKICTTSGFVGFALMAIILLATQKVKYV
VSWRQIVVLLLFPSIGGIVGYLATRLPWLDYNVAQRRTVAIETAMQNTALGLSIVLISFS
LTLPEFGTILVFPVFYGGLQLISMFPIVAIYRFLRWKGYKCVLPNEDTEEEDTELQERTE
NGVSNLAFTEDGAITENGTTKIPI
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaaccaacatgaacccaacaaccatcgcgactccgccatgtgtattagaagag
tcatcgaatgcgtcgttaagtggcattgtctgttccaacgtcacaatagggatcccggtt
gtcgacaattcagagttggttgccgcgagtgaagcgacaagaatagctacatcggtattg
atcgccttaataatgttcgggttcggttgttcggttgagccgaagaaagcgttagcgtat
tgcaagaaaccaaagcagttcatcaccgcactcgcgctgcagttattgggaatgcctctt
ctcggcttcggtctttcccaagccttcagaatgacaccgcctgaagctgcaggtgtttac
attcaagcgagttgtcctggtggaacttacagcaaccttgcagcatattgggtggacggt
gacctcaacttaagcgttctcatgacaacaatgtcgacaattctctcaatggggacttta
ccgctttggttgttcttgtttcctctaatggcaaacacaggagatactttgaaagttcca
ttcgaccagttaggatacgccctccttggtattatcccaccgttgttggttggtattccc
gtcaactataaattcccaaaacgtgctccacttattacaaagatttgtacgaccagtgga
ttcgttggtttcgccttaatggccatcatactacttgcaacacagaaggttaaatacgtt
gtatcgtggagacagattgttgtcctgttattatttccttctattggtggcatcgtcggt
tacctagcaaccaggttgccatggttggattataatgttgcacagagaagaactgttgct
atagaaaccgccatgcaaaacacagctctggggctttccattgttcttatttcgttcagt
cttacccttccggagttcggaacaatcctcgtcttcccagttttctacggaggacttcag
cttatcagtatgtttccaatagttgcgatctatcgtttccttagatggaaaggttacaag
tgtgtcctccctaatgaagatactgaagaggaagacacggaactgcaagaaagaaccgaa
aacggagtttcaaaccttgcgtttactgaagatggtgctataactgaaaatgggactaca
aagataccaatatag
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