Ciona intestinalis (yellow sea squirt): 100178091
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Entry
100178091 CDS
T01056
Name
(RefSeq) DUF21 domain-containing protein At4g33700 isoform X2
KO
K10335
ankyrin repeat and SOCS box protein 13
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100178091
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
100178091
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CNNM
CBS
Motif
Other DBs
NCBI-GeneID:
100178091
NCBI-ProteinID:
XP_018673090
Ensembl:
ENSCING00000011562
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Position
2:complement(1692656..1697772)
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AA seq
427 aa
AA seq
DB search
MTENITCSLETGNLIICNGVTYKPEVVLTYHDKLFWIYLGIYVALVLIAGLMSGLTMGLL
SLDLMSLTVLSTDGKPNEQKHAKRILPLVKRHHLLLVTLLLSNAAAVESMPLFLDKISNP
ITAIVVSVTAVLIFGEVVPQALCTRYGLAIGSTLSPLVYALMFITLPISWPLAKILDCVL
GKEHTTFFRRAELSALVSLHRTEGQENEEPLTADEVTVIKGALAMRDKQVKQVCTPMESV
FSLDVNGVMDQTTMNLLLSKGHSRVPIYEGTPDNLIGLILVKNLIKIDPDANLPIREVFE
EHKRPLLKVPHSTGLFDVLNLFQLGKSHMFIVVRENESGNTAVATKLEPEDEVIGLITLE
DVMEELIQEEIVDETDVYVDVHRKIEVAKSRRQLLSTSSNKFARQNPKSNITDVNVDSAD
DTQPLLR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatattacttgttctttggagactggaaacctaatcatttgcaatggagtg
acttataaacctgaagtagtactaacatatcatgataaattgttctggatatatcttggc
atttatgttgcgctcgttttaatagctggattaatgagtggtttgactatgggactttta
tcattagatttaatgagtttaacagtcttgtctactgatggaaaacctaatgaacagaaa
cacgcaaagcgaattttacctttggttaaaagacatcacctgctgttagttacgttactg
ctttctaatgcagcagctgtggaaagtatgccactctttcttgacaagatttcaaatccc
ataactgctattgttgtatcagtcaccgctgttttaatatttggagaagttgtaccacag
gctttgtgcacccggtatggtcttgcaattggatctaccttatctcctcttgtatatgcg
ctgatgtttattacactacccatctcatggccactagccaaaattttggattgtgttctg
ggcaaagaacataccaccttctttcgaagagcagagctaagtgcactggtttctttgcac
agaactgagggacaagaaaatgaagaacctttaactgcagatgaggtcactgtcatcaaa
ggtgcacttgctatgagagataaacaagtaaagcaagtgtgcacgccaatggaaagcgtg
ttttctttagatgtgaatggtgtaatggaccaaaccaccatgaatttacttttgagcaaa
ggccactcccgtgtaccaatctatgaaggcacccctgataatttaatcggtctaatcctc
gtcaaaaatttaattaaaattgatcctgatgccaatttaccaatcagggaagtgttcgaa
gagcacaagcgtcctttgctgaaagttccacactccacaggcctctttgatgttctcaat
ttattccagcttggaaaaagtcacatgtttattgtggtgagagaaaacgaaagcggcaac
actgctgtggctactaagcttgaacctgaggacgaagtaattggtttgattaccctggaa
gatgtgatggaggaactaatacaagaagaaatagttgatgagactgatgtgtatgttgat
gtgcatagaaaaattgaagttgcaaaatctcgacgtcaattgctctccactagctccaat
aagtttgcgcgtcaaaacccaaagtcaaacatcactgatgttaatgtggattctgcagat
gatacacaacctttgttgagataa
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