Ciona intestinalis (yellow sea squirt): 100178137
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Entry
100178137 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100178137
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00260
Glycine, serine and threonine metabolism
cin00290
Valine, leucine and isoleucine biosynthesis
cin01100
Metabolic pathways
cin01200
Carbon metabolism
cin01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
100178137
00290 Valine, leucine and isoleucine biosynthesis
100178137
Enzymes [BR:
cin01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
100178137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
ACT
Motif
Other DBs
NCBI-GeneID:
100178137
NCBI-ProteinID:
XP_002129370
Ensembl:
ENSCING00000009373
UniProt:
F6WXJ5
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MSKVNMPENLQTTSRDVDVADDVILDPNCDPDNPVVVDYDRVVDAKQCIGRGVVRTPCTW
SRMSHNLGIDIFFKKEFMQFTGSFKDRGALYSLLKLSDEQRRGGVVTTSAGNHAQALAYQ
GRKLNIPVTVVMPMQAPLVKVNSCKDLQATVILHGQRFDEAKSYAMAYGKKHNLLYINGY
DHPDILAGQGTIGLEILEDVPDVDCIVVPIGGGGLVAGIAAAAKHIRPEIKIIGVESQKC
PSWTSAVNNGKPLPCPISKQGAKDSITDGLSVIEVGVNSYATAHPLMDKMVTVSEDYVCT
AILQLMEFEKSVVEGAGAAGFAAIIAGLLPELHGLKVVTVLCGGNIDITTLGRVIDRALM
MQGRLCRFNCIISDRAGGLAEILGIVADGGASIKDIMHDRMSLPSFVYKTSVRLTVETRD
KNHARSLREKLEEHYGSDLNWKAE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagttaacatgccggaaaacctacaaaccacgagtcgtgacgttgacgtagct
gatgatgtaatattggatcctaactgcgaccctgacaacccagttgtcgttgattacgac
agagtggtggacgcgaaacaatgtattgggaggggggttgtgaggacgccatgcacgtgg
tcgcgaatgtcccataatctgggcatcgatatctttttcaagaaggaattcatgcagttc
accggaagtttcaaggaccgaggtgctttatattcgttactaaagctaagtgatgaacaa
cgtcgtggtggagtagttacaacatcagctggtaaccatgcacaagcattggcctaccag
gggaggaagctgaacataccggtcaccgtggtaatgccgatgcaagctccattggtgaag
gtaaacagttgtaaagatttacaagccaccgtcattctacatggacaacgattcgacgaa
gcgaagtcgtacgcgatggcttacggaaagaaacacaacttgttgtatattaacggctac
gatcaccccgatatattggccggtcaagggaccatcgggttggaaatcttagaagacgtt
cctgacgttgattgtattgtggtccccattggtgggggagggctggtggctgggatcgct
gcagccgccaaacatatcagaccggagattaaaattattggtgttgagtcgcagaaatgt
ccatcgtggacgtcagctgttaacaacgggaagccccttccatgcccaatatcaaagcaa
ggagcgaaggattctataacggatggtttgagtgttattgaggttggcgtgaattcttac
gccaccgcccatccactgatggataagatggttactgttagcgaggattacgtttgtacg
gccatccttcaacttatggagttcgaaaagtcggtggtggaaggagctggggcggcgggg
ttcgctgctattattgcggggttgttacccgagttgcatggactcaaggttgtgaccgtg
ttatgtggaggaaacatcgatatcactacgttgggtcgagtgattgatcgcgccctcatg
atgcagggaaggctgtgtagattcaactgcatcataagtgatagggctggagggcttgct
gagatattggggattgttgctgatggtggggcgagtatcaaagacatcatgcacgaccgc
atgtctctcccatcgttcgtttacaagacatccgttcgattgacagttgagacacgtgac
aagaaccatgcgcgaagtttgagggaaaaattggaagaacattacgggagcgacctaaac
tggaaagcagaataa
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