Ciona intestinalis (yellow sea squirt): 100178141
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Entry
100178141 CDS
T01056
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100178141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100178141
Spliceosome [BR:
cin03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
100178141
Complex B
100178141
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
100178141
NCBI-ProteinID:
XP_002131795
UniProt:
F6ZGG6
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All DBs
Position
1:complement(4032951..4038017)
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AA seq
461 aa
AA seq
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MTQFLPPNLLALFAPRDAIPYKAPLQPLTWEKDRERAPYTGLGNFSHLFEDPKDTPPPTR
GETKEEKKTRKIKEKLEKRAEEIEEEIKGWDPHNDPNAGGDAFKTLFVSRINYDTTESKL
RREFETYGKIRKVTIVKDVATGKPRGYAFVEFDRERDMHTAYKSADGKKIDGRRVLVDVE
RGRTVKGWRPRRFGGGLGSTRAGPDDSNRRSEREKERDSGRSHDDDKVRKSEDRPRERDR
EREKRRKSGDRERSDRDKDRNRDRDRDRDREKRRRDDRGDKDRRDRDRKRESDHKSSRSK
NDERASGAVDGGDGENGKKEERSRDKDRESRHRHRDRDRSDKDKERRHRDRDRGKDRDSR
SDVKEDKRDDKSMTTIKDEYGSNPGMKQEYDQTIKQEYQQNYEEPGRRYGGEGDAYNNMA
QDNSSNNGYYPEKDRMEYQQANPENKQYDRQGNYDYNPEEY
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtttctgccacctaatttacttgcattgttcgcacctcgagatgcaattcca
tataaagcgccattgcaaccgttaacatgggagaaagatcgtgagcgagcaccttatact
ggtttgggaaatttctcccatttattcgaagatccaaaagacactccaccaccaaccagg
ggagaaacaaaagaagaaaagaaaacacgaaaaataaaggagaagttggaaaagcgagct
gaggagatagaagaagaaataaagggttgggatccgcacaatgatccgaatgctggtgga
gatgcattcaaaactttatttgtatcaagaattaattacgacacaacagaaagcaaacta
cgaagggaattcgaaacatatggaaagatacgaaaggtaacgatagtaaaggatgttgca
actgggaaaccacgtggttatgcgttcgttgagtttgatcgggaaagagacatgcacact
gcttataaaagtgcggatggaaaaaaaattgacggccgtcgagttcttgttgatgttgag
cgtggacgaacagttaaaggttggagacctcgaaggtttggtggaggattaggatcgacg
cgtgcaggtcctgatgactctaatcgtcgatcagaaagagaaaaggagcgtgatagtgga
agaagtcatgatgatgataaagtacgaaaatctgaagatcgacctcgtgaaagggatagg
gaaagagaaaaacgaagaaaatcaggcgatcgggaaaggtcggatagggataaagatcga
aacagagatcgggatcgagatcgtgatcgtgaaaagcgcaggcgtgatgatcgtggtgat
aaagatcgtcgcgaccgtgatagaaagcgggaatctgatcataaatcttcacgaagcaag
aatgatgaaagggcaagtggtgcagtagatggtggagatggagaaaatggaaaaaaagaa
gagagaagtcgtgacaaagatcgggagtccaggcatcgtcacagggatcgagataggtcc
gataaagataaagaaaggcgtcatcgagatcgagaccgcggaaaagacagagatagtcgt
tcagatgtaaaagaagacaaacgagatgataagtcaatgactacaattaaagatgaatat
ggtagtaatcctggaatgaaacaagaatatgaccagacaataaagcaagaatatcaacag
aattatgaagagccaggtagacgttatggtggcgaaggtgatgcttacaataacatggct
caagacaattcctccaacaatggttactacccagaaaaagatcgtatggaataccaacaa
gctaatcctgagaacaaacaatatgaccgacagggtaattacgactacaacccagaagaa
tactaa
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