Ciona intestinalis (yellow sea squirt): 100178158
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Entry
100178158 CDS
T01056
Name
(RefSeq) calcium load-activated calcium channel-like
KO
K21891
calcium load-activated calcium channel
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178158
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100178158
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
100178158
Transporters [BR:
cin02000
]
Other transporters
Pores ion channels [TC:
1
]
100178158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF6809
Vpu
Exonuc_VII_L
DUF3899
Nucleoside_tran
Motif
Other DBs
NCBI-GeneID:
100178158
NCBI-ProteinID:
XP_018670193
Ensembl:
ENSCING00000007234
LinkDB
All DBs
Position
13:complement(1541243..1543947)
Genome browser
AA seq
183 aa
AA seq
DB search
MLGDSLLIVFISIVTALLAEGLTWLMVYRTEKFKKLKSEVDKQSKKVEKRKELLGESVNK
NQKRRLELEEEKLKSNNRDLSAVRMKSMFAIGFCFTALLGTLSSVFEGRIVAKLPFVPLG
LLQGLSHRGLMGNDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAAAKHGGGGLFQPPQ
TTK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgttgggggacagtttgttgattgtttttatttctattgtgacagctctgctggctgaa
ggtttaacatggcttatggtttatcgaaccgaaaagttcaagaaactaaaaagtgaagtg
gataaacaaagtaaaaaagttgaaaaacgtaaagaactcttgggtgagtcggtcaacaaa
aaccagaaacgacgtttggaacttgaagaagagaaattaaaaagtaacaatcgcgattta
tcggcagtgcgcatgaagtcaatgttcgctatcgggttttgtttcactgcgttgctggga
acactgagctctgtgttcgaaggtagaattgttgctaagttaccatttgtaccgcttggt
ttattacaaggtttatcacacagaggtttgatggggaatgattatacagattgttcattc
attttcctttatatattatgcacaatgtcaattagacagaatattcagaaactccttgga
tttgctccgtcacgagctgcagccaaacacgggggtggagggttatttcaaccaccacaa
accaccaagtaa
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