Ciona intestinalis (yellow sea squirt): 100178163
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Entry
100178163 CDS
T01056
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100178163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100178163
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100178163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
HEAT_EZ
HEAT
HEAT_2
Vac14_Fab1_bd
V-ATPase_H_C
Cnd1
TTI1
HEAT_EF3_N
EGF_3
Motif
Other DBs
NCBI-GeneID:
100178163
NCBI-ProteinID:
XP_018667423
Ensembl:
ENSCING00000009243
LinkDB
All DBs
Position
5:4952906..4955838
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AA seq
307 aa
AA seq
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MFTKCYEKINAEEWHSVRVLLRMVAHHVAVLTKHDLSHFALPLFDFYLETLEYRDNMTMV
DKDEVDSVEEVSVNGTISLLLKLPEATFKPLFVKLNHWGCSDDATPTRTTTFYHCTCVMA
GKLKSLFSLFAGPLLSHMMESLKHEEIDPENVTRCRYVVETFKLTLLHSSSNFMTQQRFD
MTAGVLVDQLEKSQLDNEMLQDYIINYIIPCIGQLVMSSRNDVAWQPLNYQILLKMRHKN
PEVRLHALETLLVVAEKLGDDYMVLLPETIPFLAELMEDENDNVEKRCHAVIKRMEEVLG
EPLQKYF
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccaagtgctatgaaaaaataaatgctgaagaatggcattctgtccgtgtattg
ctacgtatggtggcacaccatgttgcagtgttgaccaaacatgatctcagtcactttgct
ttaccactgtttgatttctacctggaaacactggaatatagagacaatatgaccatggtt
gataaggatgaagttgattctgtagaagaagtttcggtcaatggaacaatttcccttctt
cttaaattacctgaagctactttcaaacctctttttgtaaagttgaaccactggggttgt
tctgatgatgccacaccaacaagaaccaccacattctatcattgtacttgtgttatggct
ggcaaacttaaaagtcttttctctctctttgctggccctctcctaagtcacatgatggaa
tcgctgaagcatgaagaaattgatccagaaaatgtcactcgatgtcgctatgtagttgag
acatttaaactcacactgcttcactcaagttcaaactttatgacgcaacaaaggtttgat
atgacagcgggcgtgttggttgatcagctggaaaaatctcaactagacaatgaaatgcta
caagattacatcatcaattacatcataccctgtattggccaactggtgatgtcatcaagg
aatgatgttgcctggcaaccactaaactaccagattttgctcaaaatgcgtcacaaaaat
ccagaggttcggttacacgcactagaaaccttgctagtagttgcagagaaactgggagac
gattatatggttttgttgccagaaactatacctttcctagctgaactcatggaagatgaa
aatgataatgttgaaaagcgctgtcatgcagtgatcaaacgaatggaagaagtcttagga
gaaccactacaaaaatatttctaa
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