KEGG   Ciona intestinalis (yellow sea squirt): 100178163
Entry
100178163         CDS       T01056                                 
Name
(RefSeq) HEAT repeat-containing protein 1
  KO
K14550  U3 small nucleolar RNA-associated protein 10
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100178163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cin03009]
    100178163
Ribosome biogenesis [BR:cin03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100178163
SSDB
Motif
Pfam: BP28CT HEAT_EZ HEAT HEAT_2 Vac14_Fab1_bd V-ATPase_H_C Cnd1 TTI1 HEAT_EF3_N EGF_3
Other DBs
NCBI-GeneID: 100178163
NCBI-ProteinID: XP_018667423
Ensembl: ENSCING00000009243
LinkDB
Position
5:4952906..4955838
AA seq 307 aa
MFTKCYEKINAEEWHSVRVLLRMVAHHVAVLTKHDLSHFALPLFDFYLETLEYRDNMTMV
DKDEVDSVEEVSVNGTISLLLKLPEATFKPLFVKLNHWGCSDDATPTRTTTFYHCTCVMA
GKLKSLFSLFAGPLLSHMMESLKHEEIDPENVTRCRYVVETFKLTLLHSSSNFMTQQRFD
MTAGVLVDQLEKSQLDNEMLQDYIINYIIPCIGQLVMSSRNDVAWQPLNYQILLKMRHKN
PEVRLHALETLLVVAEKLGDDYMVLLPETIPFLAELMEDENDNVEKRCHAVIKRMEEVLG
EPLQKYF
NT seq 924 nt   +upstreamnt  +downstreamnt
atgtttaccaagtgctatgaaaaaataaatgctgaagaatggcattctgtccgtgtattg
ctacgtatggtggcacaccatgttgcagtgttgaccaaacatgatctcagtcactttgct
ttaccactgtttgatttctacctggaaacactggaatatagagacaatatgaccatggtt
gataaggatgaagttgattctgtagaagaagtttcggtcaatggaacaatttcccttctt
cttaaattacctgaagctactttcaaacctctttttgtaaagttgaaccactggggttgt
tctgatgatgccacaccaacaagaaccaccacattctatcattgtacttgtgttatggct
ggcaaacttaaaagtcttttctctctctttgctggccctctcctaagtcacatgatggaa
tcgctgaagcatgaagaaattgatccagaaaatgtcactcgatgtcgctatgtagttgag
acatttaaactcacactgcttcactcaagttcaaactttatgacgcaacaaaggtttgat
atgacagcgggcgtgttggttgatcagctggaaaaatctcaactagacaatgaaatgcta
caagattacatcatcaattacatcataccctgtattggccaactggtgatgtcatcaagg
aatgatgttgcctggcaaccactaaactaccagattttgctcaaaatgcgtcacaaaaat
ccagaggttcggttacacgcactagaaaccttgctagtagttgcagagaaactgggagac
gattatatggttttgttgccagaaactatacctttcctagctgaactcatggaagatgaa
aatgataatgttgaaaagcgctgtcatgcagtgatcaaacgaatggaagaagtcttagga
gaaccactacaaaaatatttctaa

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