Ciona intestinalis (yellow sea squirt): 100178180
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Entry
100178180 CDS
T01056
Name
(RefSeq) prostaglandin E2 receptor EP4 subtype-like
KO
K04261
prostaglandin E receptor 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04080
Neuroactive ligand-receptor interaction
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100178180
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100178180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cin04030
]
100178180
G protein-coupled receptors [BR:
cin04030
]
Rhodopsin family
Lipid
Prostaglandin
100178180
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srv
7TM_GPCR_Srd
7TM_GPCR_Srj
DUF3638
Motif
Other DBs
NCBI-GeneID:
100178180
NCBI-ProteinID:
XP_026691775
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All DBs
Position
9:6152559..6163924
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AA seq
424 aa
AA seq
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MADDVTDLKSSGFETTTTTMVWNSTDIENMGNINVGCQLKLGTTKSAVVVPMTTFALGVM
SNSLAIVTLLCFLFRAPKKRDEVTSHQSNTSRGAQQHLMVPSNTEARRHSTPVHGATVKR
KSRKVKFGPFHTLVLTLAVLDLAGTLFTSPITFILYFNESHILCQGGTPLCNYSAFAMMF
FGFTTMAMVMTMSIERLMSIRHAYYYHRKATATKALLVVLAIFIFSALLCAMPTLGFGKV
RPMFPYSWCFADWNAQAPKDKAFNFLYVSLGVTMLFVTLVCNARVIKGLVEMKKSSKWNR
KSRRRTVSRETQMIIQLLVITLIFVVCWLPLMFRIFFNQLGINLSSKRDLVAIWLVAVNP
ILDPWVYILFRKSVARCVLRLAKTIVCFEYRDWCLKISPARWRKDEVETITVAGKEFELK
DFNI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacgtcactgatttaaaaagttctggattcgaaacaacaacgacgacgatg
gtttggaattcgactgatattgaaaacatggggaatataaacgttggctgtcagttgaaa
cttggcactacaaagagcgcggtcgttgtgccaatgacaacttttgctttgggtgtcatg
agcaactcattagcgattgttactctgctttgttttttgttccgagcgccaaagaagcgt
gacgaagtgacgtcacaccagtcgaatacgtcacgaggggctcaacagcatctaatggtc
cccagtaataccgaggcgagaagacattcgactccggtccacggagctactgttaaaagg
aagtctaggaaagtcaagtttggtcctttccacacccttgtgcttacactagccgtactg
gatcttgccggcactctgttcacatcaccgatcacttttatcttgtacttcaacgaatca
catatcctctgtcagggagggacaccgctatgtaactacagcgcgttcgccatgatgttc
tttggcttcactacaatggcgatggtaatgacgatgtcgattgaacggctgatgagcatc
agacacgcttattactaccataggaaagctacagctacaaaggcgctgctggtggtcctt
gcaattttcattttctcagctctactttgcgcgatgccaactctaggctttggtaaagtt
cgaccaatgttcccatactcttggtgttttgccgactggaacgcccaagcgccaaaagac
aaggcttttaattttctatacgtcagtctcggcgtaacaatgctatttgtgacgctcgtc
tgtaatgccagagtgataaaaggtctcgtggaaatgaagaaaagctccaaatggaatcgt
aaatcacgtcgcaggactgtgagtcgtgaaacgcagatgatcatacagttgcttgttata
acactgatattcgtagtctgttggttgccactaatgttccgcatatttttcaatcagctt
gggattaacctttctagtaaaagggatctagtggcgatttggcttgttgctgttaaccct
atacttgatccgtgggtttatattctgttccgaaagtcagtcgctcgatgcgttcttcga
cttgccaaaaccattgtgtgtttcgaatacagggactggtgccttaaaatttcgcccgcg
cggtggcgcaaagacgaggtcgagacaataactgttgcggggaaagaatttgaattgaaa
gattttaacatctag
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