Ciona intestinalis (yellow sea squirt): 100178196
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Entry
100178196 CDS
T01056
Name
(RefSeq) cilia- and flagella-associated protein 57
KO
K24729
cilia- and flagella-associated protein 57
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100178196
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100178196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML
WD40_CDC20-Fz
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_WDR75_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_TEP1_2nd
Rod_CreS
Beta-prop_WDR41
CC4_CEP85
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Beta-prop_VPS8
PMD1-like
ATG16
CALCOCO1
Beta-prop_DCAF12
SPC25_N
Beta-prop_Nup120_160
DUF8221
VPS11_N
Beta-prop_WDR75_2nd
LeuD
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
100178196
NCBI-ProteinID:
XP_018671994
LinkDB
All DBs
Position
Unknown
AA seq
1228 aa
AA seq
DB search
MAIAVAQSHHLFGLRPHISGNIGYLEEQTIVFPSGNQVVRFNIDQKQQRFIPGSDKSQGM
TAIALSPNRRYVAVAEKGDKPTVTIYDMLHDQSKKRKTLSAPDLQTNEFVSLAFSPDSKY
LIAQGSRPEWMLVYWAWEKSKIMATMKTTNQSGQPVYQVSFNPQDNTQICVIGNHIFKLF
RYAEGNLKQFGFQKMDLQNYLSHAWVSDERVVVGTDTGRLLLFENGELKSEFHAALPAGS
IADTNSVRASVSMIPEDTMSSSGSGLGACQITSVVAHSKGFACAGGAGTVHLFEKTDEKD
FYRKTRIVKIPPDPHSTDPTQAENQSILSLTVSPSEETLVAATDHSQLYCIALSSADIGE
QASFEQLTHSFHSRGITGLDVCIRKPLIATCSVDQSVRIWNYETNTLELYKVFQEEAYSI
ALHPSGLYILVGFSDKLRLMNILIDDIRIFKELTIRGCKECSFSNGGHLFAAVHGNVIQI
YSSTTFENVSNLKGHNGKVRAIAWSADDSKLISSGMDGAVYEWSAAAAKRVNEVVLKSCA
YSGVTVSPSGKHTYAVGSDKSIKEITESQILRTVDSGGATLTQIVMSHSGRMLFCGTSGG
ALRSIKFPLTDSGEWAEHQAHASQITKMKITYDDQFLITVSEDACLMIWRVSDKEGRGVK
HDREVPYAEEILITKSDLEEKNQSMSELKTRVEELKMENEYQLRLKDMNYNEKIKELTEK
FIQEMESLKTKNQVLKTEKEKEVAKHEEELAEVVDKHSKDMQDLESTNNQKLMLEYEKYQ
ELQAKSQRMQEDYERQLQDADEGKEQSLEELTEYYETKLQERGSQLEQANDEARQQQREY
EETKRQIEEDADREILDIKNKYERRLRDEIETNMRLKGESGIMRKKFNSLNKEIDSKNEE
IKTMQQEKLKLENVIKSLEKDIHGLKKEIQERDETIQDKEKRIYDLKKKNQELEKFKFVL
DYKIKELKKQIEPRENDIKAMKEQIQEMESELERFHKQNTQLELNIAELKQKLRATDKEL
HYERQRVRDAEAVSKRMKTDLHNCVGFLQDPKKLKESVKSVYETHVHDDVAESTSVDTDI
QKEYSRQREHLERSVASLRKKLTKDTEIHRADNVRIMQENVALIKEINDLRRELKMTRSQ
YHELETSLGLNRSKAGKGGKRIETAATGSDTSGGRSVLRQNIEEEGPRIIEMQKGEIRKL
RNQIMDLEEQLTHRPPSGGKLPPMILTQ
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgctgtggcacagtcgcaccacttgtttggtctcagacctcacattagtgga
aacattggatacttggaagaacaaaccatagttttcccatctgggaaccaagtggttcgt
ttcaatattgaccagaagcaacaaaggtttattcctggttcagataagtcacaaggaatg
acagcaatcgcattgagtcccaatagaagatacgttgctgtggctgaaaaaggtgacaag
ccaacggttaccatctatgacatgctacatgaccagtctaaaaaacgaaagacactcagt
gcaccagatcttcaaacgaatgagtttgttagtttagctttctcgcccgactctaaatat
ctgatcgcacaaggaagtcgtcctgaatggatgttggtatattgggcttgggagaagtcg
aagattatggcaactatgaagacaactaaccagtcaggccaaccagtgtaccaggttagt
ttcaatccccaagacaatacccagatctgcgtcattgggaatcacatctttaaacttttt
cgatacgctgaaggaaatctgaaacaattcgggttccagaaaatggatttgcaaaactat
ctttctcatgcatgggtttcggatgagcgcgtagtggttggcacggatacggggcgattg
ttgttgtttgaaaacggggagcttaagtcagagttccacgcagctctacctgctggttct
attgctgataccaacagtgtgagagcaagtgtgagcatgatcccggaggacacgatgagc
tcttcaggtagtggccttggtgcgtgtcagatcacatcagtggtcgcacattcgaagggg
ttcgcatgcgctggtggggcagggacggttcatctgttcgagaaaactgatgaaaaagat
ttctatagaaagacaaggattgtgaagattccccctgacccccacagtaccgaccccacc
caagcagaaaaccaatccattctctcattaactgtgagtccaagtgaagaaacattggtg
gcggcaaccgaccacagtcaactatactgtattgcactttcatctgctgatattggagag
caagcgtcgtttgagcaactcactcattcattccacagtcgaggcatcactggtttagat
gtttgtatcaggaaacctctcattgctacttgctctgtggatcaatctgtgaggatatgg
aactatgagacaaacaccttggagttgtacaaagtgttccaagaagaagcttacagcatc
gctcttcatccgtctggactttacatcttggttggcttcagcgacaagcttcgtttgatg
aatatccttattgatgatattcgcatctttaaagagctcaccattagggggtgtaaagag
tgttccttcagtaatggtggccacttatttgctgctgtacacggcaacgtgatacaaata
tattcttcaactacatttgagaacgtctccaacttgaaaggacataatggaaaggtgcga
gccatagcatggagcgctgatgatagtaagctcatctcctctggtatggatggtgctgtt
tatgaatggtcagcagctgcagctaaacgagtgaatgaagtcgttctaaaatcttgcgct
tattctggtgttacagtgtcacctagtggcaaacatacctacgctgttggctccgataaa
tcaatcaaagaaatcaccgaatctcagattcttcgaaccgtggattctggtggtgcaact
ttgacccagattgtgatgtcacacagcggtcgtatgttgttctgtggcacctcaggtggt
gcgttacgctcgattaaattcccgctcaccgattcaggggagtgggctgaacatcaagcg
cacgcatcgcagatcactaagatgaaaatcacatacgatgatcaattcctcatcactgta
tcggaggatgcttgtctcatgatctggagagtctcggataaagaaggacgaggagtcaaa
cacgatcgggaagtcccgtacgctgaggagattctaatcactaagtcagacctggaagaa
aagaaccaaagcatgtctgagctaaaaacaagagtagaagaactaaagatggaaaatgaa
tatcaactcaggcttaaagatatgaattataatgagaagataaaagaactgaccgaaaaa
tttattcaggaaatggaaagtttaaaaacaaagaaccaagttttgaaaacagagaaagaa
aaagaggttgcaaaacatgaagaggaattggctgaggttgtggacaagcattccaaggac
atgcaggacctagaatccaccaacaaccagaagttgatgttggaatatgagaagtaccag
gagctccaagcaaagtcccagcggatgcaggaagattatgagaggcaacttcaggatgct
gatgaagggaaggagcaatccttggaggagctcactgagtattatgaaactaaactacaa
gagagagggtcacaacttgaacaggcgaatgacgaagctcggcagcagcaacgagagtac
gaggagacgaagaggcaaatcgaggaagatgcggaccgtgagatcttggacatcaagaat
aaatatgaacgccgactccgagatgaaattgagacgaatatgagattgaaaggagagtct
gggattatgaggaagaagttcaacagcttgaacaaggagattgacagcaagaacgaagag
attaaaacgatgcagcaagaaaaacttaaactcgaaaatgtcattaagtcactggagaaa
gatattcatggtttaaagaaggaaattcaagaacgtgatgaaacaatacaagataaggaa
aagagaatttacgatttgaagaaaaagaaccaagaacttgagaagttcaagtttgttttg
gattacaagataaaagaattaaagaaacagattgaaccaagagagaatgatattaaagca
atgaaagaacaaatacaggaaatggaaagtgaattggagcgcttccacaaacaaaacact
caactggagctcaatatcgcagagttgaaacaaaagttgagagccacggacaaggaattg
cattatgaacgacaaagggttcgcgacgcggaagccgtgagcaaacgaatgaagacggat
cttcataattgcgttggtttccttcaagatccaaagaaactgaaagaatccgtcaagtct
gtttacgagactcatgttcacgatgacgtggctgaatctacaagtgtggacacggatata
caaaaggaatactcgaggcagcgtgaacatctcgaacgctccgtggcctcgttgaggaag
aagttgacaaaagacactgagatccatcgcgctgataacgttcgaataatgcaggagaac
gtagctttgatcaaagagataaatgacttacgtcgggagcttaaaatgacacgaagtcaa
taccacgaattagaaacatcgcttggtttgaacagatctaaagctgggaaaggcgggaag
agaatcgaaacagcggctactggttcagataccagcggcggtagaagcgtgctgcgtcaa
aatatcgaagaggaaggcccaaggattattgagatgcagaaaggagagatccggaagtta
cgtaatcagataatggatttagaggagcagttaacccatcgcccaccttctggagggaaa
ctcccgcctatgatactcacccagtaa
DBGET
integrated database retrieval system
