Ciona intestinalis (yellow sea squirt): 100178241
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Entry
100178241 CDS
T01056
Name
(RefSeq) G-patch domain and KOW motifs-containing protein-like
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100178241
Spliceosome [BR:
cin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100178241
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Gene cluster
GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
G-patch
KOW
Motif
Other DBs
NCBI-GeneID:
100178241
NCBI-ProteinID:
XP_004226250
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All DBs
Position
7:1411145..1413154
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AA seq
533 aa
AA seq
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MDDKKSISFGFKKKIQTKVDESKVVKDAPEESSTKDFLTEVDAKSLQKVTPKELVIPLIS
KNRYVMPKKEKLQTNEITAGIEDEAAKELMAESKQFLDQAPPEEQSNEDFENMAVPLLLR
NKVPDGYEDDTVLDVSIRPEEATIADYEQIPIQAFGMAMLRGMGWNPEVGIGRTFKKNTK
MLETVVRPKGLGLGANAPNKKLPNGQSGNKENETLEIKKGAFVFVNSGSHKNKYGVVEGM
DPDNAQCVVSFALGGTASVGQFALKAVAKSEYEKYSKDISRTSGRDKKPENRSKNKHNTG
IDNDSEQNREDSSHKRKHKKRQKEEEERNHKRSRHAHKEHQSRSKHKRRHYEEDINDSHH
KKSRSVNSSPKRKNKSKKSSPSTHSGTSDSDSDSKRKYLSSKPKSTWLRPHLKVRMVDKK
YKKGKYFREKLIVVDILDATGRCSCKSEEGILLDDVREQMLETVVPKSISDAYVSITSRG
RLKHDGKLAKILEKDRSNCRAYLQLLEDRDVCLDVDFDDICEYVGDVEAEDMF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggatgataaaaaatcaatttcatttggatttaaaaagaaaatccagaccaaggtggat
gaaagtaaagttgtaaaagatgctcctgaagagagcagcaccaaggactttctcacagag
gttgatgctaaaagtttgcagaaggtgactccaaaggaattggtaatccctctcatatca
aagaatagatatgtgatgccaaaaaaagaaaaactgcaaacaaatgagataactgcagga
attgaagatgaagcagcaaaggaactaatggcagaatcaaaacagtttttggatcaagct
cctccggaagaacaaagtaatgaagattttgaaaacatggctgttcctcttcttttaaga
aataaagtcccggatgggtatgaggatgacacagtattggatgtttcgatccgccccgaa
gaggcaactattgctgattatgagcagattccaattcaagcttttgggatggctatgtta
aggggtatggggtggaatccagaggttggcattggcagaacatttaaaaagaatacaaaa
atgctggagacagttgtgagacctaaaggacttggacttggagcaaatgctccgaataaa
aagctcccaaatgggcaaagtggaaacaaagaaaatgagacgttggagattaaaaagggg
gcttttgtgtttgtaaattcaggatcccataaaaataagtatggtgttgttgaaggtatg
gatccagacaatgcacagtgcgtggtaagctttgctcttggtgggacagccagtgttggt
cagtttgctctgaaggctgttgcgaaatcagagtatgaaaagtatagtaaggatatttca
cggactagtggtagggataaaaagccagaaaatcgatcaaaaaataaacataacactggt
attgataatgatagtgaacaaaatcgtgaagattcatcccacaaaagaaaacacaaaaag
agacaaaaagaagaagaggaaagaaatcataagcgctctcggcatgcacataaggaacac
cagtcaagatctaagcacaaacgtcgtcattatgaagaagatattaatgactctcatcac
aaaaaatcccgttctgtaaatagttccccgaagcggaaaaataaaagcaaaaagtcgtca
ccttcaacacacagtggtacgtctgattcagattcagattctaaaagaaaatatctttct
tcaaaaccaaagtcaacatggctccgtccacatcttaaagttcgtatggttgataaaaaa
tacaaaaaaggaaaatacttcagggaaaaactgatcgtggttgatatattggatgctaca
ggtagatgctcttgtaagtcggaggaaggtattcttttggatgatgtccgagagcaaatg
ctggagacagtcgtcccaaaatccatctcagatgcttatgtgtcaatcacaagtagggga
aggctcaaacatgatggaaaacttgcaaaaatccttgaaaaagatcgttccaactgtcgg
gcttatttacagcttcttgaagacagagatgtttgtttagacgtcgattttgacgacatc
tgcgagtatgtgggagatgtagaagcagaagacatgttctga
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