Ciona intestinalis (yellow sea squirt): 100178259 Help Entry 100178259         CDS       T01056                                  Name (RefSeq) clathrin heavy chain 1-like   KO K04646   clathrin heavy chain Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04142   Lysosome cin04144   Endocytosis cin05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:cin00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100178259    04142 Lysosome     100178259  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     100178259  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cin04131]     100178259   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cin04147]     100178259 Membrane trafficking [BR:cin04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     100178259 Exosome [BR:cin04147]  Exosomal proteins   Proteins found in most exosomes    100178259 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_PEP5_VPS11 TPR_Vps41 Motif Other DBs NCBI-GeneID:  100178259 NCBI-ProteinID:  XP_002130279 Ensembl:  ENSCING00000001739 LinkDB All DBs Position 12:complement(1672194..1691166) Genome browser AA seq 1686 aa AA seqDB search MAQNLPIKFQEHLQLQNVGINAANIGFSTLTMESDKFICVREKVADQAQVVIIDLADSAN PIRRPISAESAIMNPASKVIALKAGRTLQIFNMEMKSKLKAHTMTEDVVFWKWISTNMVG LVTETSVYHWSMEGDSQQPVKMFDKHPSLAKCQIINYRTDAKQKWLLLIGISAQANRVVG AMQLYSVERRVSQPIEGHAASFAQIKLEGNKEESTLFCFAVRGPQGGKLHIIEVGSPAAG NQPFTKKAVDVFFPPEAANDFPVAMQVSPNQNVVFVVTKYGYIHMYDLETAVCIFMNRIS ADTIFVTAPHEATGGLIGVNRKGQVLSVSVDEENVVPYITNTLQNPDLALRFAVRNNLGG ADELFSRKFNTLFAQGNYTEAAKVAANAPKGILRTSQTIQKFLSVPAQPGQNSPPLLQYF GILLDQGKLNKFESLELCRPVLQQGRKHLMEKWLKDEKLECSEELGDLVKPVDSTLALSI YLRATIPNKVIMCFAETGQFQKIVMYAKKVGYTPDYVFLLRNVMRVNPETGKQFAMMLVQ DDEPLADVAQIVDVFMEQNLIQQCTAFLLDALKNNRPAEGALQTRLLEMNLMHAPQVADA ILGNQMFTHYDRAHVAQLCEKAGLLQRALEHFVDLYDIKRAIIHTHLLNPEWLVNYFGSL SVEDSLECLKAMLTANIRQNLQICVQVATKYHEQLTTEKLIEVFESFKSFEGLFYFLGSI VNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDADKVKNFLKEAKLTDQLPLIIVC DRFDFVHDLVLYLYRNNIPKYIEIYVQKVNPSRLPVVVGGLLDVDCQEDTIKNLIMVVRG QFSTDELVEEVEKRNRLKLLLPWLESRVHEGSEEPATHNALAKIYIDSNNNPERFLRENP FYDSRVVGKYCEKRDPHMACVCYERGQCDDELIRLCNENSLFKSEARYLVRRKDVELWGK VLEDTNQYRRQLIDQVVQTALGEAQDPDEISVAVKAFMAADLPNELIELLEKIVLDNSMF SDHRNLQNLLILTAIKADSSRVMDYITQLDNYDAPDIANICIENELFEEAFAIFNKFDVN TSAISVLIEHVKNLDRAYEFAERCNEPTVWSQLARAQLNSGMIKEAIDSYIKADDPSSYM EVVEASNKSENWEDLVRYLQMARKKARESYVETELVFAFAKTNRLADLEEFISGPNNANI QQVGDRCYDQKMYEAAKVLFNNISNFARLASTVVHLGEYQTAVDSARKANSTRTWKEVCF ACVDGEEFRLAQICGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFT ELAILYSKYKPGKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIVTM MAHPTDAWKEGQYKDIITKVANIELYYKSLQFYLDYKPMLINDLLNVLSPRMDHTRAVAF FRKVQHLPLVKPYLRTVQTHNNKAINEALNDLLIEEEDYSGLRNSIDAYDNFDTIALAQR LEKHELIEFRRIAAYLYKGNNRWKQSVELCKKDLLYKDAMTYAGESRDTELAEELLEWFL ERQRYECFSAGLYSCYDLLRPDVVLEQAWRHGISDYAMPYLIQVMREYTIRIDKLETSEN VRKQEEEQTENKPIVYDNPTLMITAGPSYPQPGYAAPQMPGMPGGMPPAGMQGPPGMMGG GYNFGM NT seq 5061 nt NT seq  +upstreamnt  +downstreamnt atggctcaaaatctccctattaaatttcaagaacatcttcagcttcaaaatgttggcatc aacgcagcaaatatcgggttctccactcttacaatggaatcagataaatttatttgtgtg cgagaaaaagtggctgatcaggctcaggttgtcattattgatcttgctgactcagcaaat ccgattcgaagacctatttctgctgagtcagcaatcatgaaccctgcaagcaaagtaatt gccttgaaggcgggtcgcacacttcagatttttaacatggaaatgaaatcaaaacttaaa gctcacaccatgacagaagatgtggtgttttggaagtggatatcaaccaacatggttggt ttggtcactgaaacctctgtatatcactggagcatggaaggagattcccaacaaccggta aaaatgtttgacaaacatccaagtcttgccaaatgccagatcattaactacaggacggac gctaaacaaaagtggttgctactgattgggatttccgcacaagccaatcgagtggtgggt gcaatgcaactctactcagttgaacgcagagtcagtcagccaattgaaggacatgctgca tcttttgctcaaattaaacttgaaggaaataaggaagaatcgaccctcttctgttttgct gtaagaggaccacaaggaggcaaacttcatatcatcgaggttggatccccagctgcaggc aaccaaccattcaccaagaaagctgtcgacgttttttttccaccggaggccgctaatgat ttccctgttgcaatgcaggtttctccaaaccagaatgtggtgtttgtggtgactaaatac ggatacattcatatgtatgatcttgaaactgctgtatgcatctttatgaaccgaatcagt gccgataccatcttcgtcactgctcctcatgaagctactggaggacttattggagtcaac agaaagggacaggttctatcagtttctgtagatgaggaaaatgtggtgccgtacataacc aacactttacaaaaccctgacttagctcttcgttttgctgttcgtaacaatcttggtggt gcagatgaactcttctctagaaaattcaacacattatttgcccaaggcaactacactgag gcggccaaagttgctgcaaatgctccaaaaggtatcctgaggacttcccaaaccatccag aagtttctctccgtgcctgcccaaccaggccaaaactctccaccattgttgcaatacttt ggcattctattggaccagggcaaactgaacaaatttgagtcactggagttatgtagaccg gtgcttcaacaaggcaggaaacatctgatggagaaatggttgaaggatgagaaacttgaa tgttctgaagagcttggagatctcgtgaaacctgttgattcaactcttgccctgtctatc tacctcagggcaactattcctaataaggtgatcatgtgttttgcggagacggggcaattc cagaagattgtgatgtatgcaaagaaggtcggttacactcccgattatgtcttcctcctc cgtaatgtgatgcgggttaatccggagacgggaaaacagtttgcgatgatgttggtacaa gatgatgagccactcgcggatgttgctcagattgtggatgttttcatggaacaaaacctc atccaacaatgcactgcgttcctccttgatgcattgaagaataatagaccagcagaagga gctctgcagacacgtctgcttgagatgaacctcatgcacgccccacaggttgcggatgcc attcttggcaaccagatgttcacccattacgatcgtgcccatgttgcgcaactatgtgag aaagccggtctgttgcaacgagcgcttgaacattttgtggacctctatgatattaaacgt gccatcatccacacacatctgcttaaccctgaatggttggtcaactacttcggcagcttg tcagttgaagattccttggaatgcttgaaggcaatgttgacagctaacattcgacagaat ctacagatttgtgttcaagtggcaacaaaataccatgagcaacttacaactgaaaagctg attgaggtttttgaatcctttaaaagcttcgaaggtttattttacttccttggatcgatt gtgaacttcagtcaagatcctgatgttcacttcaaatacatacaagcagcttgtaagaca ggtcagatcaaggaagtcgagaggatttgtcgtgaaagcaactgctatgatgcggataag gtgaaaaacttcttaaaagaagccaagttgacggatcaacttccattgatcatcgtgtgc gatcgatttgactttgttcacgatctcgtcctctatttgtatcgcaacaacataccaaag tatattgagatctatgtgcagaaggtgaatccttctcgtctcccagttgttgtcggagga ttgttggatgttgattgtcaggaggacaccatcaagaacctgatcatggtcgtcagagga caattctctacagatgagcttgtggaagaagttgagaagagaaacaggctaaaacttctt cttccatggttggagtcgcgtgtgcatgaaggatccgaggaaccagctacccacaatgca cttgctaagatctacatcgattcaaacaataaccccgagcgattcttgcgtgagaatcca ttctatgatagtcgagtggttggtaaatactgcgagaagcgagatccacatatggcttgc gtttgctacgaacgtggccagtgtgatgatgaacttatcaggctttgcaatgaaaactcc ttgttcaaatctgaagctcgatatttggtgagaagaaaggacgttgagttgtggggaaaa gttttggaagatacaaaccaatacaggaggcaacttattgatcaggtggtacagacagca cttggtgaagcacaagacccagatgaaatctcggttgccgtgaaagctttcatggcagcg gatcttccaaatgaactcattgagttgttggagaagatcgtgttggataattcaatgttt tccgatcacaggaacctccagaacctcttgattctcactgcgatcaaagctgacagctct cgtgtgatggattacatcactcaacttgataattatgatgctccagatatcgcaaatatt tgcatcgaaaacgaactcttcgaggaagcattcgcgatatttaacaagtttgacgtcaac acttctgcaatctctgttttgatcgagcatgtgaaaaacctcgaccgtgcgtatgagttt gcggaacgttgcaacgagcccaccgtgtggtcacaactggcacgagctcagttgaactcg ggaatgataaaggaagcgattgattcttacatcaaagctgatgatccaagctcttacatg gaggtggtggaagcttcaaataaatccgagaattgggaggatttggttcgttacttgcag atggctcgtaagaaggcacgagaatcttatgttgagactgaacttgttttcgctttcgct aaaaccaatagactcgcagatcttgaagagtttattagtggcccaaacaatgccaacata caacaggttggagacagatgttacgatcaaaagatgtacgaggcagccaaggttctcttc aacaacatctccaactttgctcggctcgcatccacggtcgtccacctcggtgaatatcaa actgctgttgattccgcacgtaaagccaactccacacgaacatggaaggaggtttgcttt gcttgtgttgatggtgaagagtttcgtctcgcacaaatatgtggccttcacattgttgtt catgctgatgaattggaagaacttattaattactaccaggaccgcggatactttgaagag ttgatcacgatgttggaggctgctcttggacttgagcgtgctcacatggggatgttcacg gaacttgccatcctttactccaagtataaaccagggaagatgagagaacatctggaactt ttctggtcaagagtcaacatccccaaggttcttcgagctgcagaacaagcacacttgtgg gcagagttggtgttcctgtatgacaaatatgaggaatatgataacgccattgttaccatg atggctcatcccaccgatgcatggaaagaaggacaatataaagatattataaccaaggtt gccaacattgagctctactacaaatccctgcagttttatctggactacaaacccatgctt ataaacgacttactcaacgtattgtcaccacgtatggaccacacaagagctgttgctttc ttcaggaaagttcaacatttgccactcgtcaaaccatatctgcgtaccgtgcagacacac aacaacaaggcgataaatgaggcattgaatgatcttcttattgaagaagaggattactct ggtcttcgcaactccattgatgcgtatgataactttgacaccattgctcttgcacaacgt ttagagaaacacgagttgattgagttccgtcgtattgcagcatacttatacaaaggaaac aacagatggaagcaatctgttgagttgtgcaaaaaagatctgctctacaaggatgcaatg acatatgcaggggaatcccgggacacagagttggcagaggaattgttggagtggttcctt gaaagacagagatacgaatgtttctctgctggactttattcctgttatgacttgcttcga cctgatgttgtattggaacaagcatggagacatggaatcagtgattatgcaatgccatat cttattcaagtcatgagagagtacacaataaggattgacaaacttgaaacatcggaaaat gtgagaaaacaagaagaagaacaaacagaaaataagccgatcgtatacgataaccccacc ctaatgatcaccgctggaccctcctatccacaacctggctatgctgctcctcagatgcca gggatgcctggaggaatgcctcctgctggtatgcagggacctcctggcatgatgggtggt ggctataacttcgggatgtaa

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