Ciona intestinalis (yellow sea squirt): 100178361
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Entry
100178361 CDS
T01056
Name
(RefSeq) synaptosomal-associated protein 29-like
KO
K08509
synaptosomal-associated protein 29
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04130
SNARE interactions in vesicular transport
cin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100178361
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100178361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178361
Membrane trafficking [BR:
cin04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100178361
SNARE
SNAP-25 (Qb,c)
SNAP-29
100178361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF745
DUF5089
Motif
Other DBs
NCBI-GeneID:
100178361
NCBI-ProteinID:
XP_002129612
Ensembl:
ENSCING00000004884
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MSGNRWLDDDDINPSSGGVNKWGGNDGYEDFDPNKDYFTQVVKRKENNILESTQRSLRML
DESERVGVATGQELVRQGEVLRRTEKTVDKMEQDLKESDRHLRSIKSVWGAFMNKFSKEP
PAPKSMNAGTEFDAGTSNNLENVMRKCEDVEDERRQNEEHPVIARQQRAQQMYMDGGRDE
SSSQNKMNQVEENLDLMGQSLSRLKQLGLGMQNEIEAQDPIIERLHGKVNKVDDKIHSTN
KEMMRLNHR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtaatcgttggctagatgatgacgacatcaatccttcgtccggcggggttaac
aaatggggcggcaacgatgggtacgaagattttgaccccaacaaagattatttcacgcaa
gttgttaaaaggaaagaaaacaatattttggaaagcactcagcgatcattaagaatgttg
gacgaatccgagagagttggcgtggcaacaggacaggaacttgttcggcaaggagaagtc
ttaaggaggacggagaaaacagttgataaaatggagcaagatctgaaggagagtgatcgc
catttacgcagcataaagagcgtttggggagctttcatgaacaagtttagtaaagagccg
cctgcccctaagtctatgaatgcagggacagaattcgatgctggtacctcaaataatttg
gaaaatgtgatgagaaaatgcgaagacgtagaggatgagagaagacagaatgaggaacat
cccgtgatagctcggcaacagagagcacagcagatgtatatggatggtggaagagatgaa
agttcttctcagaacaaaatgaaccaagtggaagaaaaccttgaccttatgggccaaagt
ttgtctcgtttaaaacaacttggcttgggcatgcaaaacgagatagaagcacaagatcca
atcattgaaagactgcacggcaaagttaataaagtggacgataagattcattctaccaat
aaagaaatgatgagacttaaccatagataa
DBGET
integrated database retrieval system
