KEGG   Ciona intestinalis (yellow sea squirt): 100178366
Entry
100178366         CDS       T01056                                 
Name
(RefSeq) DNA repair protein REV1-like isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100178366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cin03400]
    100178366
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    100178366
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C REV1_C BRCT BRCT_2 IMS_HHH POLH-Rev1_HhH LIG3_BRCT UBM PTCB-BRCT Cdd1 Rtt106_N HHH_5
Other DBs
NCBI-GeneID: 100178366
NCBI-ProteinID: XP_009859722
LinkDB
Position
9:complement(4033635..4043385)
AA seq 1014 aa
MGGRGIFKVMSDDGWSSMGGYMEAKIQKLEKQFQEKSSRNEQLSSIFNKVAIHVNGYTNP
TADELKTLMAKHGGKYHAYYNSNYTTHVIASNLPRAKAKDLKPNQKIVRPEWIVESITAG
TLLPIQPYLLVANSSVSRQKILTSKKEDKVNPSSNPSTSKCIEDTTPQVKPEAGENTPQC
STVVANHVNQQANSRTSKIAATTDSGFLDEFYANSRLHFISTWKNDLADFVRSLSQNNQP
LTGKEELLKLTKEQKGNLLLNGKVIMHIDMDCFFVSVGLLSRPHLKGRPVAVTHHSSSTP
SEHKQRPGTDPNFERSYYKEKLGKNFEQKFPSNPVGPSNPSDGQASGSASKANTVPSYSE
IASCSYEARAAGLRNGMFYGRAKELCPDLIAIPYDFEAYKDISQKLYTVLASYTQSLEAV
SCDEALLDVTQLVEDTSLTPQVIAQNIRGKILDATGCNASAGIGPNIALARMATRLGKPN
GQHEVTLQQAEEFIRDLPVKDLPGVGRATASRLRELGASTCGELQKIHPDLLKKEFGNKT
GQKLHELSKGIDEREVCQSKERKSVSADVNYGIRLKTEDEMKTFLNNLSNEVSSRLKKTG
LSGKKITLKVMVRHSDAPVETAKFKGHGVCNSISRSKNLNEYTDDCDIIGREGITLMKSL
QLNVTDLRGIGIQLSTLTSTSSLSKSRLSIQQFIKKGKRKSSDMQIITPEKKIDSAVYGN
QEMESTVKTDCQNKVAKTEQAFDLREEKCETNDTAKNDSINTSFLDALPEELRKEIEKDY
KAQKNALQQVKKPEPSSASNSPTKSLLQQSTSRGQSSKRGRPTGSKSRRKVSRKVVKKSP
VKKMLPLKAVTSPNKLITDMFSKIPKKEVGKVDPVAKRSLEDDVTICEGKNDNTKTERKI
SKPSLGGATTTAEVRDVIRKWTRAYSQEFPLDSDIEDIINYLCTLVNHVRNLESTELILR
TIRRYIGFVIEQNENVEMQTAWLVAYSQILCAVNKKVENLYGGAQFQLPSLHLP
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgggaggtcgggggattttcaaagttatgtctgatgatgggtggtcaagcatgggaggt
tacatggaggcaaaaatacaaaaacttgagaaacaatttcaagaaaaaagctcgcgaaat
gaacagttgtcgtccatttttaataaagttgcaatacatgtgaatggatacacgaatcct
actgcagatgaactgaaaacattgatggcaaaacatggtggaaaatatcatgcttactat
aacagcaactacactacgcatgtgatagcttccaacttgcctcgtgccaaagcaaaagat
ttgaaaccaaaccaaaaaattgtccgacctgagtggatagttgaaagcatcactgcgggg
actttgctgccaattcaaccttacttacttgtggctaattcttcggtttcaaggcagaaa
atactgacaagcaaaaaggaagataaagtgaatcctagttctaacccatccacctcgaaa
tgtattgaagacacgacaccacaagtaaaaccagaggcaggtgaaaatacacctcaatgc
tctacagtagttgccaaccatgtaaaccaacaagctaattcacgaacaagcaaaatagca
gcaacaacggactctggatttttagatgaattctatgcaaattcaaggcttcattttatc
tcaacttggaaaaatgatctagctgattttgtaaggtcactgtcacaaaacaatcaacct
cttactggaaaagaagaattattgaaattgacgaaagagcaaaaaggtaacttgctgtta
aatggtaaagtgatcatgcatatagacatggactgtttcttcgtctctgttggtcttctg
tccagacctcatttaaaaggacgtcctgtagcggtgacgcatcactctagctcaacacct
tcggagcataaacaacgaccgggaacagacccaaactttgaaaggagttattacaaagag
aagctcggaaaaaactttgaacagaaatttcccagcaatccagttggacccagcaatccg
agtgatggacaagcatctggcagtgcaagtaaagccaacacagttccttcatattccgag
attgcatcttgtagttatgaagcaagagcggctggacttcgaaatgggatgttctatgga
agagctaaagaactctgtccagatcttatagctataccttatgactttgaggcatataag
gatatctcacagaagttatacactgtccttgcatcatacacacaatccttggaagcagtt
agttgtgatgaagcattacttgatgtcacacaacttgtcgaagacacaagtctcacccca
caagttatcgcacaaaatataagaggaaaaatattagacgcaactgggtgtaatgcttct
gcaggcattggtccaaatattgctctagcaagaatggcaactaggctgggcaaaccaaat
gggcaacatgaagtcacacttcagcaagctgaggaatttatcagagacctcccagtgaaa
gatctgcctggtgttggtcgtgccacagcttcaagattaagagaattaggtgcaagcaca
tgcggagagctacagaaaattcacccagacttactaaaaaaggaattcgggaacaaaact
ggtcaaaaactccatgaattatcaaaaggaatagatgagagagaggtgtgtcagtccaag
gaaagaaagtcagtatctgctgatgttaattatgggatacgactcaaaactgaggatgaa
atgaaaacctttctcaacaatctttctaatgaagtaagcagcagactaaagaaaactggc
ttatctggcaaaaaaatcactttaaaagtgatggtacgacattccgatgcccctgtagaa
acagcaaagtttaaaggtcacggggtttgcaattctatttctcggagtaagaatttaaac
gaatacactgatgattgtgacatcataggaagagagggaataacattaatgaaatctctg
caattgaatgtaacagacttgagaggtataggaatccaactttccaccttaacttcaacc
tctagcttatccaaatctcgactctcaattcaacagtttataaaaaaaggaaaaagaaaa
tcatctgatatgcagattataacgcctgaaaagaaaatcgattcagctgtttatggaaat
caagaaatggaatcaacagtaaaaacagattgccaaaataaagttgccaaaactgaacaa
gcatttgatttaagagaagaaaaatgtgagactaatgatactgccaagaatgattcaata
aacacaagttttcttgatgctttacctgaagaactacgtaaagaaattgagaaagattat
aaagctcagaagaacgctctgcaacaagtgaagaaacctgaaccatcttctgcttccaat
tctccaaccaagtcattacttcaacaatcaacttcaaggggtcagagttcaaaaaggggt
cgtccaacagggtcaaaatcgaggcgtaaagtcagccgaaaagttgtgaaaaaatcacca
gtgaaaaaaatgctgcctctaaaagcagtcacaagtccaaataagctaattaccgatatg
ttttccaaaatccccaaaaaggaggttggaaaagtcgatccagttgctaaaaggagtctt
gaagatgatgttacaatatgtgaaggaaaaaatgataatacaaaaactgaaagaaaaata
tccaaaccttctttgggtggagcaacaacaacagctgaagttcgcgacgtgatcaggaaa
tggacgagagcttattcccaagagtttccacttgattctgacattgaagatattataaac
tacttatgcacgctggtgaatcatgtgcgaaatttggaaagtacggaacttattcttcga
accatacggagatacattggatttgttatcgaacagaatgaaaatgttgaaatgcagacg
gcgtggctggttgcttacagccaaattttatgtgctgtaaataagaaggtagaaaatttg
tatggtggcgcacaatttcagttgccatctttacacttaccatga

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