Ciona intestinalis (yellow sea squirt): 100178377
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Entry
100178377 CDS
T01056
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
Adaptin_N
Arm_2
DUF4704
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
100178377
NCBI-ProteinID:
XP_002131658
Ensembl:
ENSCING00000009410
UniProt:
F6TM19
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All DBs
Position
12:4502483..4516818
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AA seq
869 aa
AA seq
DB search
MSASLDTRNLLHRNGSLSESSDEQIMDEDSAASILASVREQEDQFAKLTKEIEQERRTVA
NQLNNDHYGSQNDMEYTESMNSDGYYDGQPSEYETFSRSENFSDPMEETEVLIGDDGVAK
TVTKRVVTKTVTERRVRHVEEQGSLPRNNHNGSGPRHMSERSIPDNYDSMNRNHPGKLHS
PHYGDETSNLLRSSASSSSASDDRGGKPSGYEYPSKQSFGSNDEVRKLAPEKFQPEEYGL
EDDRRSTDDENDEYRGLEPNSYRERGSVSSGSSDQRYGNNIDDDMPVAAPRSVAKPTAGR
APLARQEAGSRGSLDRLGSNWHTPTLEEVIKMLTYNLPIVQQNAAAYIQHLCFNDDKLKA
DVRKLGGIPALVRLLDNPSSEVELNACGALRNLSYGSKNDKNKVEIKNCEGVPAVVRLIR
AAKNIDTKEQATGTLWNLSALPELKGQVLELGLEPLTNLIIAPYADVVSQQDGKPKEVEM
VDVFTNAVGTVRNLSSYDNIENRKRLRDCPNLVFSLFSVLRANIENGDIQNKATENCVCV
LRNLTFQLQREVQQADTQLYMLDQPKDSNDAAETSCFGKKKDKPVEVVDQVPADDPDASG
TSLLWQPEASRIYVALLAESQKRDELTEAALGALQNLTSGTWQWAVYARVVVRKEKALPV
VIDRLRTDRDQIVRSGTTTLTNLAEDVKNKELIGKFAMKDLVYKLPGGSDPNVRLSDTTT
IAVLNTIRKLVEKSPENTRNLRDAAGIERITTINNSRDSSRFHDKVVKAAGQLLKAIWAN
KEVRSLLKKDGWNKVHFTPTVPVNTLPRTSHQATSEPYERPTSSPNPPSTGGRRAQRSTS
QSNEDIQMTTPGVTLTDTNRRKEPANSWV
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatctttggatacccgaaaccttttgcatcgaaacggaagtttgtcagagagc
agcgatgaacaaatcatggatgaagattcagctgcatctatcctcgcctctgtaagggag
caggaagatcagtttgcaaaactcacaaaggaaatagagcaagaacgtcgcacagtagca
aatcaacttaacaatgatcattatggaagtcaaaatgacatggaatacacagaaagtatg
aactcagatgggtattacgatggccaacccagtgaatacgaaactttttcccgaagcgaa
aacttcagcgatccaatggaagaaaccgaggttttaattggtgatgatggagttgctaaa
actgtcacaaaacgagttgtcaccaaaacagtcactgaaagaagagtgagacatgtagaa
gaacagggtagtttgccaaggaacaaccataatggaagtggaccccgtcatatgtctgag
agaagtattcctgataattatgattcaatgaatcgcaaccatccaggaaagctgcacagt
cctcattatggtgatgaaaccagcaacttattaaggtcgtccgctagtagctcgtcagca
agcgatgaccgtggtggaaaaccatccggttacgaatatccatccaaacaaagctttggt
tcaaacgatgaagtgaggaaacttgctccagagaagtttcagccagaggaatatggtttg
gaagacgacagacgaagtacagatgatgaaaatgatgaatacagaggtctcgaaccaaac
tcatatcgtgaaagaggaagtgtttcatcgggtagcagtgatcaaagatacggcaataac
atagacgatgacatgcctgtcgctgctcccaggtctgttgccaaaccaaccgctggtcgc
gctccactggctcggcaagaagctggaagtcgtggtagtcttgatagacttggaagtaac
tggcacacaccaaccttggaggaagtaatcaagatgttgacttacaaccttcccattgtg
caacaaaatgcagctgcttatatacagcatctgtgttttaatgatgataaattgaaagca
gatgttagaaaactaggtggcattcctgcccttgtaaggttattagacaaccctagtagt
gaagttgagttgaatgcatgcggggcgttaagaaacctcagctacggatcgaaaaatgat
aaaaataaagtggagataaagaattgtgagggcgtgcctgctgttgtgaggttaataagg
gcggccaagaacattgatacaaaagaacaagctacaggtactttgtggaacttatcagca
ctaccagaacttaaaggacaagtgcttgagttgggacttgaaccgttaaccaacctcatc
atagctccatacgctgatgtggtgtcgcaacaagatgggaaacctaaggaagtggagatg
gtcgatgtatttactaatgctgttggtactgtgagaaatttgagttcgtatgacaacata
gagaatcgtaagcgattgagggattgccccaaccttgtcttctcgttgttcagtgtgctg
agagccaacatagaaaatggagatattcaaaataaggctacagagaattgtgtgtgcgtg
cttcgtaacttgacattccagcttcaacgtgaagtacagcaagctgatacccagctatac
atgcttgatcaaccaaaagatagcaatgatgctgccgaaacttcgtgctttgggaagaaa
aaagataaaccagtagaggttgtagatcaagttcctgctgacgacccagatgcgtctgga
acatcattgctatggcaaccagaggcatcaaggatctatgtagcgttgcttgcagagagc
cagaaacgagatgaactaacagaggctgctcttggtgcgttgcagaatcttacaagtgga
acttggcagtgggcagtatatgcacgtgttgttgtacgtaaagagaaagctcttccagtt
gttatcgatcgtttaagaacagatcgcgaccaaattgtgaggtcaggaacaacaacgcta
accaatcttgctgaagatgtaaagaataaagaacttattggcaagtttgcaatgaaagac
ttggtatacaaacttcctggaggttcagatccaaacgttagactgtcagacaccactaca
atcgctgtgctcaacactatccgtaaacttgtcgaaaaaagtcctgaaaacactcgtaac
ttaagggatgcagcgggaatcgagaggattacaacaatcaacaactcaagggacagcagc
aggttccatgataaagttgtaaaagctgcgggccaattattgaaagcaatttgggcaaat
aaagaagtgaggtctttactgaagaaggatggctggaataaggttcactttactcctact
gtgcctgtgaacacactaccaagaacttcccaccaagccaccagcgaaccatacgaacga
ccaaccagctcacctaaccctccctccaccggaggcaggagagcacaacgcagcacgagc
caatcaaatgaggatatacaaatgacaactcctggagtaacattgacggacaccaaccgt
agaaaagaacccgcaaattcctgggtttga
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