KEGG   Ciona intestinalis (yellow sea squirt): 100178377
Entry
100178377         CDS       T01056                                 
Name
(RefSeq) catenin delta-1 isoform X1
  KO
K05690  catenin (cadherin-associated protein), delta 1
Organism
cin  Ciona intestinalis (yellow sea squirt)
SSDB
Motif
Pfam: Arm HEAT_EZ Adaptin_N Arm_2 DUF4704 Atx10homo_assoc
Other DBs
NCBI-GeneID: 100178377
NCBI-ProteinID: XP_002131658
Ensembl: ENSCING00000009410
UniProt: F6TM19
LinkDB
Position
12:4502483..4516818
AA seq 869 aa
MSASLDTRNLLHRNGSLSESSDEQIMDEDSAASILASVREQEDQFAKLTKEIEQERRTVA
NQLNNDHYGSQNDMEYTESMNSDGYYDGQPSEYETFSRSENFSDPMEETEVLIGDDGVAK
TVTKRVVTKTVTERRVRHVEEQGSLPRNNHNGSGPRHMSERSIPDNYDSMNRNHPGKLHS
PHYGDETSNLLRSSASSSSASDDRGGKPSGYEYPSKQSFGSNDEVRKLAPEKFQPEEYGL
EDDRRSTDDENDEYRGLEPNSYRERGSVSSGSSDQRYGNNIDDDMPVAAPRSVAKPTAGR
APLARQEAGSRGSLDRLGSNWHTPTLEEVIKMLTYNLPIVQQNAAAYIQHLCFNDDKLKA
DVRKLGGIPALVRLLDNPSSEVELNACGALRNLSYGSKNDKNKVEIKNCEGVPAVVRLIR
AAKNIDTKEQATGTLWNLSALPELKGQVLELGLEPLTNLIIAPYADVVSQQDGKPKEVEM
VDVFTNAVGTVRNLSSYDNIENRKRLRDCPNLVFSLFSVLRANIENGDIQNKATENCVCV
LRNLTFQLQREVQQADTQLYMLDQPKDSNDAAETSCFGKKKDKPVEVVDQVPADDPDASG
TSLLWQPEASRIYVALLAESQKRDELTEAALGALQNLTSGTWQWAVYARVVVRKEKALPV
VIDRLRTDRDQIVRSGTTTLTNLAEDVKNKELIGKFAMKDLVYKLPGGSDPNVRLSDTTT
IAVLNTIRKLVEKSPENTRNLRDAAGIERITTINNSRDSSRFHDKVVKAAGQLLKAIWAN
KEVRSLLKKDGWNKVHFTPTVPVNTLPRTSHQATSEPYERPTSSPNPPSTGGRRAQRSTS
QSNEDIQMTTPGVTLTDTNRRKEPANSWV
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgtcggcatctttggatacccgaaaccttttgcatcgaaacggaagtttgtcagagagc
agcgatgaacaaatcatggatgaagattcagctgcatctatcctcgcctctgtaagggag
caggaagatcagtttgcaaaactcacaaaggaaatagagcaagaacgtcgcacagtagca
aatcaacttaacaatgatcattatggaagtcaaaatgacatggaatacacagaaagtatg
aactcagatgggtattacgatggccaacccagtgaatacgaaactttttcccgaagcgaa
aacttcagcgatccaatggaagaaaccgaggttttaattggtgatgatggagttgctaaa
actgtcacaaaacgagttgtcaccaaaacagtcactgaaagaagagtgagacatgtagaa
gaacagggtagtttgccaaggaacaaccataatggaagtggaccccgtcatatgtctgag
agaagtattcctgataattatgattcaatgaatcgcaaccatccaggaaagctgcacagt
cctcattatggtgatgaaaccagcaacttattaaggtcgtccgctagtagctcgtcagca
agcgatgaccgtggtggaaaaccatccggttacgaatatccatccaaacaaagctttggt
tcaaacgatgaagtgaggaaacttgctccagagaagtttcagccagaggaatatggtttg
gaagacgacagacgaagtacagatgatgaaaatgatgaatacagaggtctcgaaccaaac
tcatatcgtgaaagaggaagtgtttcatcgggtagcagtgatcaaagatacggcaataac
atagacgatgacatgcctgtcgctgctcccaggtctgttgccaaaccaaccgctggtcgc
gctccactggctcggcaagaagctggaagtcgtggtagtcttgatagacttggaagtaac
tggcacacaccaaccttggaggaagtaatcaagatgttgacttacaaccttcccattgtg
caacaaaatgcagctgcttatatacagcatctgtgttttaatgatgataaattgaaagca
gatgttagaaaactaggtggcattcctgcccttgtaaggttattagacaaccctagtagt
gaagttgagttgaatgcatgcggggcgttaagaaacctcagctacggatcgaaaaatgat
aaaaataaagtggagataaagaattgtgagggcgtgcctgctgttgtgaggttaataagg
gcggccaagaacattgatacaaaagaacaagctacaggtactttgtggaacttatcagca
ctaccagaacttaaaggacaagtgcttgagttgggacttgaaccgttaaccaacctcatc
atagctccatacgctgatgtggtgtcgcaacaagatgggaaacctaaggaagtggagatg
gtcgatgtatttactaatgctgttggtactgtgagaaatttgagttcgtatgacaacata
gagaatcgtaagcgattgagggattgccccaaccttgtcttctcgttgttcagtgtgctg
agagccaacatagaaaatggagatattcaaaataaggctacagagaattgtgtgtgcgtg
cttcgtaacttgacattccagcttcaacgtgaagtacagcaagctgatacccagctatac
atgcttgatcaaccaaaagatagcaatgatgctgccgaaacttcgtgctttgggaagaaa
aaagataaaccagtagaggttgtagatcaagttcctgctgacgacccagatgcgtctgga
acatcattgctatggcaaccagaggcatcaaggatctatgtagcgttgcttgcagagagc
cagaaacgagatgaactaacagaggctgctcttggtgcgttgcagaatcttacaagtgga
acttggcagtgggcagtatatgcacgtgttgttgtacgtaaagagaaagctcttccagtt
gttatcgatcgtttaagaacagatcgcgaccaaattgtgaggtcaggaacaacaacgcta
accaatcttgctgaagatgtaaagaataaagaacttattggcaagtttgcaatgaaagac
ttggtatacaaacttcctggaggttcagatccaaacgttagactgtcagacaccactaca
atcgctgtgctcaacactatccgtaaacttgtcgaaaaaagtcctgaaaacactcgtaac
ttaagggatgcagcgggaatcgagaggattacaacaatcaacaactcaagggacagcagc
aggttccatgataaagttgtaaaagctgcgggccaattattgaaagcaatttgggcaaat
aaagaagtgaggtctttactgaagaaggatggctggaataaggttcactttactcctact
gtgcctgtgaacacactaccaagaacttcccaccaagccaccagcgaaccatacgaacga
ccaaccagctcacctaaccctccctccaccggaggcaggagagcacaacgcagcacgagc
caatcaaatgaggatatacaaatgacaactcctggagtaacattgacggacaccaaccgt
agaaaagaacccgcaaattcctgggtttga

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