Ciona intestinalis (yellow sea squirt): 100178379
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Entry
100178379 CDS
T01056
Name
(RefSeq) GPI transamidase component PIG-S-like
KO
K05291
GPI-anchor transamidase subunit S
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
100178379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIG-S
Motif
Other DBs
NCBI-GeneID:
100178379
NCBI-ProteinID:
XP_002124261
Ensembl:
ENSCING00000021675
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MFGSRSSYDSDDFNSKKTQSIAAVATGLIFVVLGVPIWWNTTKVYRANLPFTEIAELNQD
AGLKVGINVNVVVADNCDFEAVKSKLEDYFGNFGGSVSAKPIFVKYNVTYSPKSVDLGLE
GEVAGTIRVAVSCGNFDDFKINVETNREISAQIGRKTENLDEFGKILVEVLKQGVVGEEM
LEEVVANIRKEGGSGRKDEELMKMVPPSSEFEVIFTLLCPDAEKMTWDVERAILEHITPI
LEELKPIFHFHISSQVLYSTKLRVRPKIMKNSTTNEVKYHYLQGNQLSNIINSIESRLGS
HLSTFPTLNFVLYLTDISNNPLYIQKGDGSPSKSNNFLLPRWGGMTIYNPQEGAREVDLD
SVMPTFLTNLRTLVGLRNNYPNIDKQVIFKPPTWPGITGWETDYLLRLRSVENVATSTNT
LGSLEKLLHQIDNIIINDDVADSVFQSVAAIVEAKQAISVGNLTRAMSSSRDAFVSSQSA
FFHPSLLELLYFPEDQKFAIYVPLFLPISLPVLVSLVFVYKRYKNKDSCDKSKVE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggagtcgcagttcttatgattcggatgattttaacagcaaaaaaacgcaaagt
attgcagcagttgcaactggattaatttttgtcgttcttggggttccaatatggtggaac
acgaccaaagtttacagggcaaatctgccgttcactgaaatagctgaattaaatcaagac
gctggtttaaaggtcggaattaatgttaatgttgttgtggctgacaattgcgattttgaa
gcagttaagtcaaaattggaggattattttggaaactttggcggatctgtttcagctaag
ccgatatttgtgaagtataatgtaacttactcgccaaaatcggtggatttggggttggaa
ggggaagtggctggtactataagagttgcagtaagttgtggcaattttgacgattttaaa
ataaatgttgaaacaaatcgtgaaatttcggctcaaattggaagaaagactgaaaattta
gacgaatttggaaaaattttggttgaagttttaaaacagggggtcgtgggtgaagaaatg
ttggaggaagttgtcgcgaacatccgcaaagaaggaggaagtgggaggaaagatgaggag
ctgatgaagatggttcctcctagctccgagtttgaagtgatctttactcttctatgtccg
gatgcagaaaagatgacttgggatgtagaaagggcaatcttggagcacataactccgatc
ttggaggaattgaaaccgatctttcatttccacatctcatcccaagtcctctactcaact
aaacttcgtgttcgacccaaaataatgaaaaactcgacgactaatgaagtgaaataccat
tacttacaaggcaatcagctttctaacataataaactcaatagaaagtcgactaggttca
catttatcaacttttcctactctcaactttgtcctttatttgacagatatttcaaacaac
cccttatatatacagaaaggtgacggttcgccttcgaaaagtaacaactttcttttgccc
cgctggggtggcatgacaatatacaatcctcaagaaggagccagagaggtggatttagat
tccgtaatgccaacttttctcaccaatctacgaacacttgtaggattgcgtaataattac
ccaaacattgacaaacaagtgattttcaagccgcccacgtggccggggatcactgggtgg
gaaacggattatttgctgcgacttcggtcggttgaaaacgtcgctacatctacgaatacc
cttgggtctctagaaaaacttctacaccaaatcgacaacatcataattaacgacgatgtc
gcagattccgttttccaatcggtcgctgcgatcgttgaagcgaaacaagcgatctcggtc
ggaaatttaacaagagcgatgtcatcttcacgtgacgcatttgtttcatcacaatcagct
ttcttccatccatcgctattagagttattgtattttcctgaggatcaaaagtttgcgatt
tatgttccgctatttttgccaataagtttgcctgttcttgtttctttagtatttgtttat
aaacgatataaaaacaaggacagttgtgacaaatcaaaagtagaatag
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