Ciona intestinalis (yellow sea squirt): 100178418
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Entry
100178418 CDS
T01056
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100178418
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100178418
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100178418
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100178418
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100178418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_5
Vps4_C
TniB
AAA_25
TIP49
IstB_IS21
AAA_16
AAA_14
Mg_chelatase
nSTAND3
AAA_2
DUF815
NPHP3_N
AAA_19
RNA_helicase
AAA_24
AAA_7
AAA_33
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
100178418
NCBI-ProteinID:
XP_018672625
LinkDB
All DBs
Position
Unknown
AA seq
295 aa
AA seq
DB search
MAKRIMDTAVKPEGNMVKFDDVTGQHTAKQALQEIVILPALRPDLFHGLRSPAKGLLLFG
PPGNGKTLLAKAVASEAKSVFFNISAATLTSKWVGEGEKMVKALFAVAREVQPSIIFIDE
IDSLLRTRQENENDSTRRLQTEFLLQFDGVGSGEGDQVLVMGATNRPHELDDAALRRFPK
RIYVRLPDVGTRGDLIKMLLKKHDSPLGDREIKELGRRTEGYSFSDLTELAKDASLGPVR
EIPQAMFTTIDVNSMRKINFNDFLKSLKKIRPSPSMELLKTYESWNSHHGDTSDS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaggattatggacacggctgttaaacctgaggggaacatggttaagtttgat
gacgttacggggcaacatacagctaaacaagctctgcaagaaatcgtcatcttacctgct
ctacgaccggacttatttcacgggttgcgatcccccgcgaaggggttgttattattcggg
ccccccggtaacgggaagacacttctcgcgaaggctgtggcatcggaagcaaaatcggtt
ttcttcaatattagcgcagccacgttgacgtcaaagtgggttggggaaggggagaagatg
gtgaaggcgttgtttgctgtcgcacgggaggttcaaccgagtatcatcttcatcgatgag
attgattctctcctccggacacgacaagagaatgagaacgactcgacgcggaggttgcaa
accgagttccttcttcagtttgacggggtgggctcgggggagggggatcaagtcctagtc
atgggagcaaccaaccgacctcatgaacttgacgatgctgcgttgaggaggtttccaaag
aggatctacgttcggctcccagatgttgggacacgaggtgatctgataaagatgttgttg
aagaaacatgactcaccactaggtgacagggagattaaggagcttgggaggcgtacggag
ggttactcattcagtgatttaacggaacttgcgaaagatgcttcgcttggtcccgtgcgt
gagattccgcaagctatgttcacaaccattgacgtgaactcgatgaggaaaatcaacttt
aacgatttcttgaaatctttgaaaaagattcgcccgagcccgtcgatggaacttttgaaa
acttacgagtcatggaatagtcaccatggcgatactagtgactcgtga
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integrated database retrieval system
