Ciona intestinalis (yellow sea squirt): 100178437
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Entry
100178437 CDS
T01056
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme-like isoform X1
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00500
Starch and sucrose metabolism
cin01100
Metabolic pathways
Module
cin_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
100178437
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100178437
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
100178437
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100178437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
CBM_48
Motif
Other DBs
NCBI-GeneID:
100178437
NCBI-ProteinID:
XP_002126483
Ensembl:
ENSCING00000018363
LinkDB
All DBs
Position
6:569548..576571
Genome browser
AA seq
676 aa
AA seq
DB search
MSVTEIYQRYGMFEKTKMAIESVEGLERFTQGHKEFGIMMTDNGGVRCMEWVPDVKAVYL
KGEFSNCWELRKFEARNFGKWELYIPPCYDGSCPIQHLSELKLVIETHDNQRLERISPWA
KYVVQRGDDATFKWLFWNTPRNQIQKYTQRPSKPDRLRIYEAHIGIASDRYEVSSYRHFT
RQVLPRIRDLGYNTLLLMALVEHPYYPSFGYQVTNYFAASSRYGTTAELKELIDTAHAMG
IYVIMDIMHGESSKNILDGLNMFDGTEGGFFKQGKEGTNQEHNTRVFDYSKWETVRFLLS
QLRFYLDEFQIDGFRFCGVTEMVYRDMETGRRMTDEYEQYFGTHMNLEAISYLMLMNDML
HKFYPEVTTIAEEMSGLPCITRLVSEGGLGFDYKMAMDIPEKWMKLISNTRDEDWCMEYI
QNFLTNQRPGEKRIAYVENHEQNEASLMTLSRNLIGNSPMSETEQLTISLDRGLSLYKMI
RLLTHAFTGQGYMNFIGNEFGHPDWVELPSPANNDSYKFARRQLYLADNDQLRYKYLKRY
DTAINKLEQNFAWLKSNQSVVTRKHEDDKVFVFERAGLIFVFNFHPTKSYKNYKIPVQNG
GSYNIVLDSDEKFFGGKNRNQQQTNFNTQNGYYENCNNSTMVDMPSRSAFVMSQCNNMPR
EEYQHIITSYHGEFWH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaacagaaatttatcaaaggtatggaatgttcgagaaaacaaagatggcgata
gaaagcgttgaaggattggagcgatttacgcaaggccacaaagagttcgggatcatgatg
actgataacggtggcgtgaggtgcatggagtgggtacccgatgttaaagctgtttatctt
aaaggagaattcagtaactgctgggagcttagaaaattcgaggctagaaatttcggtaaa
tgggaattgtatatccccccgtgttacgacggtagctgccctattcaacacttgagcgaa
ctgaagcttgtaatcgaaacacatgataaccaacgtcttgaacgtatttcaccttgggca
aagtacgttgtacaacgtggagatgatgctacgtttaaatggcttttctggaacacacca
agaaaccaaatacaaaagtacacacaaagaccaagcaaaccggaccgccttcgaatctac
gaagctcatattggaattgcgtctgaccgttatgaagtgtccagctaccgacatttcaca
agacaagtgttgccacgtatacgagaccttgggtacaacactcttctacttatggcgctt
gtagagcacccatattacccaagtttcggataccaagttaccaactatttcgcagcttca
agtcgttatggaacaactgccgagttaaaagaactgatcgacactgcgcatgcgatggga
atttacgtcataatggacattatgcacggggaatcgtcaaagaacattctggatggattg
aatatgtttgacggtacagaaggcgggttctttaaacaaggaaaagaaggcacaaaccaa
gaacataacacaagggtgtttgattacagcaaatgggaaacagttcgctttctgctttcg
caacttcgattttacttggacgagttccaaatcgacggcttcagattctgtggtgtgaca
gaaatggtctaccgagatatggagacaggccgacgaatgacagacgaatacgaacaatac
ttcggaactcatatgaacttggaagctatttcatatttaatgctaatgaacgatatgctg
cataaattctaccccgaagttacaactattgccgaggaaatgagtggcttgccatgtatt
acacggcttgtaagcgaaggtgggcttggattcgattacaaaatggcgatggatattcca
gaaaaatggatgaagctcatttccaacacgcgagacgaggattggtgtatggaatatatt
caaaatttcctgaccaatcagaggccaggagagaaaagaatcgcctacgtggaaaatcac
gagcagaacgaagcaagtctaatgacactcagtcgaaatttgatcgggaattctccgatg
tcagaaaccgagcagttaactatttcattggaccgtggactcagtttatacaaaatgatt
cgcctgcttacccatgcttttactgggcaaggatacatgaactttataggaaacgagttc
gggcatcctgattgggtagagctaccctcgcctgcaaacaacgacagttacaaatttgcg
agacgacagctctacctagcggacaacgatcagctacgatacaagtacctcaagagatac
gataccgcaattaataaattggaacaaaactttgcttggttgaagtccaatcagagcgtc
gtaacacgtaagcacgaggatgacaaagtttttgtattcgaacgagctggtcttatattt
gtattcaacttccatccgactaaaagctacaaaaactacaagatacctgtacaaaatggc
ggaagctacaatattgttttggattcggacgaaaaattcttcggtggcaaaaaccgcaac
cagcaacaaacaaatttcaatacgcagaatggatattacgaaaattgcaacaactccaca
atggtggacatgccttctagatccgcttttgtgatgtcacaatgcaacaatatgccacgc
gaagaatatcagcatattattacgtcataccatggcgaattctggcattaa
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