Ciona intestinalis (yellow sea squirt): 100178559
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Entry
100178559 CDS
T01056
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100178559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100178559
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100178559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100178559
NCBI-ProteinID:
XP_026695595
Ensembl:
ENSCING00000015044
UniProt:
F6SUX9
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MSSFSTRSSLERSTWPNKLEYQLSLFCYVLGLSSFWRFPYLAYENGGAPFVYAFLLLYIL
VGIPLVFLEMAWGQYSNLAPLQAFRTVPVMQGIGVCMLFLSCAVLLYFGVVSYYILVYLA
SCFSNPIPWTTCDHSWNTRKCQEILNPNCASQGHLTYRQGEGYGIVENGEFIRKSVCNYT
ADGTHTSPAVEYWTKNLVNNDAVCNNLPDIDRILFGSTAQVLAPPIIIISVFLGIRFLSG
VIAMAKHVQFTGKVAYLLSTIPFAVSVMLLVRCVTLDGAVNGIIYLFVPSDPMAFISPKL
WKDAVGQVFITLLTSWGGLITWSSYNRFYNKYYVDASLLIGVAPILSILSTISVFGVVGH
LGTMTLRPDLSKVLSNVSGPMVPLVMYSEALSQMWGDDLPWSLVVFISMFLSSATAMFPC
LECILSCISDSVKIFRKLILRIITTIFLLLISFGIYYGLPCLLQWTGLQMIEFFDTFSLP
FCFIIIALAELLLLSYSFGFKLLGTNTKAMTRNACLKSHFWSVMWGGVSPLVLLGCLVYS
IVGIIRDGVGSMGPRLYLPHNATNGWTLVAGSVMVGFVFLVLILVAIIRVLQSGGPCIGR
LRNSFTPHMGTSPSNGGGDISHGNGELFLSDYTSHRERGGIEILIDEDIVTSV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattcagtacaagaagcagtcttgaaagatcaacatggccgaataaattggaa
taccagctgagtttattctgttacgtgttgggacttagtagtttttggagatttccctac
ctagcttatgaaaatggtggagcaccatttgtatacgcttttttactcttgtacattctt
gttggcattcctctggtgtttcttgaaatggcatggggacaatacagcaatcttgcacca
ctacaagctttcagaaccgtcccagtcatgcaaggtattggagtttgcatgctgttttta
tcatgtgcagtgctcttatacttcggtgtggtgtcttattacatcctggtgtatcttgca
tcatgtttttccaaccccataccatggacaacatgtgatcactcatggaatacaaggaag
tgtcaagaaatcttaaatccgaactgcgcctcacaaggccatcttacttacagacaagga
gagggatatggaattgttgaaaatggtgaatttatcaggaaaagtgtttgtaattacact
gccgatggaacgcacacctcgcctgctgtagaatattggaccaagaacttagtgaacaac
gatgcagtgtgcaacaatctacccgacattgatcgaattctgtttggatctacagcgcaa
gtccttgcacctccaattatcatcatttctgtctttcttggaatccggtttctctccggt
gtgatagcgatggcaaaacatgttcagttcactggcaaggtggcttatctattgagcacg
ataccttttgcggtctctgtcatgttactggttcgttgtgtaactttggatggagcagtg
aatggaatcatttatctttttgtaccgagtgatccgatggctttcatttcacccaaactt
tggaaagacgccgttggtcaagtattcataacacttttaacttcatggggtggtctcata
acatggtcgtcatacaacagattctacaacaaatattatgtggatgcatctctgcttatc
ggagtggcgccaattctttcaattttatcaacgatttctgtatttggggtagttggtcac
ctggggaccatgacactacgtcccgatttatccaaagtgctttcaaatgtcagcggacct
atggttcctttggttatgtattcggaagcattatcacaaatgtggggggatgatcttcca
tggagtctcgtcgtattcatatcaatgtttttatcatcggctactgcaatgtttccatgt
ttggaatgcatcctctcttgtatttcggattctgtgaaaatcttccgtaaactgatcctt
cgcatcatcaccaccatcttcctcttgctcatctcgtttggaatttactacggactacct
tgtctcttacaatggacaggattgcagatgattgaattcttcgacacattttcccttcca
ttctgcttcatcattatagctcttgcggaacttttgcttctctcatattcatttggattc
aaacttcttggcacgaacacaaaagcaatgacgcgaaacgcttgtcttaaaagtcatttc
tggtcagtcatgtggggaggtgtcagcccacttgttttactgggttgtttagtatattcg
atagttggcattatacgtgatggcgtaggtagcatgggacctcgattatatcttccacac
aatgcaacaaatggatggacgttggtggccggaagtgtgatggttggttttgtgttcctt
gtgctcatactggtagccatcatccgtgttttgcaatctggtggaccatgtattgggcga
ttgcgtaattcgttcaccccacacatgggtacttcacccagcaacgggggtggtgacatc
tcgcatggcaacggggaacttttcctcagtgattacacaagtcacagggagagagggggg
attgaaattctcattgatgaagatatcgtgacaagtgtttaa
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